RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TFAP4Q01664 338 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 TRIM60Q495X7 471 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-202ENST00000262396 HOMER2Q9NSB8 354 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 MTMR4Q9NYA4 1195 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 ZNF214Q9UL59 606 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-202ENST00000262396 ADAMTS5Q9UNA0 930 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 STX8Q9UNK0 236 aa14.54□□□□□ -0.08
TRAF4-202ENST00000262396 ROBO3Q96MS0 1386 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 PGK1P00558 417 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 SLC1A4P43007 532 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 PPARAQ07869 468 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 ZNF792Q3KQV3 632 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
TRAF4-202ENST00000262396 Q7L0L9 218 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 SEC62Q99442 399 aaKnown RBP14.53□□□□□ -0.08
TRAF4-202ENST00000262396 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAF4-202ENST00000262396 PCDHB15Q9Y5E8 787 aa14.53□□□□□ -0.08
TRAF4-202ENST00000262396 TMEM232C9JQI7 657 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 RANBP6O60518 1105 aaKnown RBP14.52□□□□□ -0.09
TRAF4-202ENST00000262396 PQBP1O60828 265 aaKnown RBP14.52□□□□□ -0.09
TRAF4-202ENST00000262396 FDX1P10109 184 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 STAT2P52630 851 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
TRAF4-202ENST00000262396 MSL3Q8N5Y2 521 aaKnown RBP14.52□□□□□ -0.09
TRAF4-202ENST00000262396 NEDD1Q8NHV4 660 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 NUP133Q8WUM0 1156 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 MYH7P12883 1935 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 ALPK3Q96L96 1907 aa14.52□□□□□ -0.09
TRAF4-202ENST00000262396 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 RAG1P15918 1043 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 TAL1P17542 331 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-202ENST00000262396 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 ZMYM1Q5SVZ6 1142 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 FAM160B2Q86V87 743 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 GMCL1P1Q8NEA9 526 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 CHST13Q8NET6 341 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 REPS2Q8NFH8 660 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
TRAF4-202ENST00000262396 BADQ92934 168 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 MKL1Q969V6 931 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 EVI5LQ96CN4 794 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 STARD7Q9NQZ5 370 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 SYNPO2Q9UMS6 1093 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 TACC3Q9Y6A5 838 aa14.51□□□□□ -0.09
TRAF4-202ENST00000262396 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 SYNGAP1Q96PV0 1343 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 DCDC2CA8MYV0 355 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 CLTBP09497 229 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 MCCP23508 829 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 OAZ1P54368 228 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 TLE2Q04725 743 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 CTDSPL2Q05D32 466 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
TRAF4-202ENST00000262396 ZNF697Q5TEC3 545 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 PI4K2BQ8TCG2 481 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
TRAF4-202ENST00000262396 FAM161BQ96MY7 647 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 CRBNQ96SW2 442 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 ACAD9Q9H845 621 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 SLC38A10Q9HBR0 1119 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 TMEM39AQ9NV64 488 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 PHF24Q9UPV7 400 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 RIPK3Q9Y572 518 aa14.5□□□□□ -0.09
TRAF4-202ENST00000262396 IGKV6D-41A0A0C4DH26 115 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 A0A1W2PQ45 241 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 A0A1W2PQY0 241 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 C6orf222P0C671 652 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 ALAS1P13196 640 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 ACVR2BQ13705 512 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 CCDC174Q6PII3 467 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 PCSK9Q8NBP7 692 aaKnown RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 STAG1Q8WVM7 1258 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 LENG1Q96BZ8 264 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 GLT1D1Q96MS3 346 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 RANBP2P49792 3224 aaKnown RBP14.49□□□□□ -0.09
TRAF4-202ENST00000262396 A0A0G2JMZ2 1700 aa14.49□□□□□ -0.09
TRAF4-202ENST00000262396 IGHA2P01877 340 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 ZNF865P0CJ78 1059 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-202ENST00000262396 KCTD1Q719H9 257 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 GMCL1Q96IK5 515 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 TSEN34Q9BSV6 310 aaKnown RBP14.48□□□□□ -0.09
TRAF4-202ENST00000262396 ABHD16BQ9H3Z7 469 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 PDLIM7Q9NR12 457 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 RNF146Q9NTX7 359 aa14.48□□□□□ -0.09
TRAF4-202ENST00000262396 MOXD2PA6NHM9 499 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 DLL1O00548 723 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 DUSP11O75319 330 aaKnown RBP14.47□□□□□ -0.09
TRAF4-202ENST00000262396 ACLYP53396 1101 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 KCNA10Q16322 511 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 TKFCQ3LXA3 575 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
TRAF4-202ENST00000262396 ARMCX2Q7L311 632 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms