RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 USP17L3A6NCW0 530 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 USP17L4A6NCW7 530 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 PPP1R3GB7ZBB8 358 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 PPP4CP60510 307 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 KLHL10Q6JEL2 608 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 USP17L1Q7RTZ2 530 aa25.52■■□□□ 1.68
MCF2L-201ENST00000261963 SMYD4Q8IYR2 804 aaPredicted RBP25.52■■□□□ 1.68
MCF2L-201ENST00000261963 ARHGAP6O43182 974 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 GRM4Q14833 912 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 SPATA1Q5VX52 437 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 TYW1BQ6NUM6 668 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 CERS3Q8IU89 383 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 C4orf32Q8N8J7 132 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 STAMQ92783 540 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 MAD2L2Q9UI95 211 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 TAF1LQ8IZX4 1826 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 STX17P56962 302 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 MAP3K9P80192 1104 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 PDXDC2PQ6P474 469 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
MCF2L-201ENST00000261963 BLIDQ8IZY5 108 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 IQUBQ8NA54 791 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 CNBD1Q8NA66 436 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 SLC44A5Q8NCS7 719 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 MTRQ99707 1265 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 PARD6BQ9BYG5 372 aa25.51■■□□□ 1.67
MCF2L-201ENST00000261963 RRP15Q9Y3B9 282 aaKnown RBP25.51■■□□□ 1.67
MCF2L-201ENST00000261963 CALML3P27482 149 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 NT5C2P49902 561 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 GYS2P54840 703 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 PPP2R3AQ06190 1150 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 FAM196AQ6ZSG2 479 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 RSRC2Q7L4I2 434 aaKnown RBP25.5■■□□□ 1.67
MCF2L-201ENST00000261963 TGFBRAP1Q8WUH2 860 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 SH3GLB2Q9NR46 395 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 USP21Q9UK80 565 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 SYNRGQ9UMZ2 1314 aa25.5■■□□□ 1.67
MCF2L-201ENST00000261963 ACTN2P35609 894 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 ADKP55263 362 aaKnown RBP25.49■■□□□ 1.67
MCF2L-201ENST00000261963 GSTO1P78417 241 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 FAM177A1Q8N128 213 aaPredicted RBP25.49■■□□□ 1.67
MCF2L-201ENST00000261963 BAG1Q99933 345 aaPredicted RBP25.49■■□□□ 1.67
MCF2L-201ENST00000261963 MKNK2Q9HBH9 465 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 CDKAL1Q5VV42 579 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
MCF2L-201ENST00000261963 ZNF804AQ7Z570 1209 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 RABGGTAQ92696 567 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 PCDHA4Q9UN74 947 aa25.49■■□□□ 1.67
MCF2L-201ENST00000261963 M0R2N6 131 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 TEX33O43247 280 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 BAG3O95817 575 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 JAKMIP3Q5VZ66 844 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 RASGRP4Q8TDF6 673 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 BLZF1Q9H2G9 400 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 TCP11L1Q9NUJ3 509 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 LY75O60449 1722 aa25.48■■□□□ 1.67
MCF2L-201ENST00000261963 RTFDC1Q9BY42 306 aaPredicted RBP25.48■■□□□ 1.67
MCF2L-201ENST00000261963 CYTH3O43739 400 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 GPSM2P81274 684 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 PRR5LQ6MZQ0 368 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 PPP2R2CQ9Y2T4 447 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 MRFAP1Q9Y605 127 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 STX10O60499 249 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 TSPY3P0CV98 308 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 TSPY8P0CW00 308 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 ARL6IP4Q66PJ3 421 aaKnown RBP25.47■■□□□ 1.67
MCF2L-201ENST00000261963 MAPKAPK5Q8IW41 473 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 GOLGA6L1Q8N7Z2 621 aa25.47■■□□□ 1.67
MCF2L-201ENST00000261963 GOLGA6L9A6NEM1 432 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 GNG11P61952 73 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 LEKR1Q6ZMV7 388 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 GOLGA1Q92805 767 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 SAP30BPQ9UHR5 308 aaKnown RBP25.46■■□□□ 1.67
MCF2L-201ENST00000261963 RASA1P20936 1047 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 LONRF2Q1L5Z9 754 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 WWC2Q6AWC2 1192 aa25.46■■□□□ 1.67
MCF2L-201ENST00000261963 ADD3Q9UEY8 706 aaKnown RBP25.46■■□□□ 1.67
MCF2L-201ENST00000261963 H3BQF6 201 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 IVLP07476 585 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 PBX1P40424 430 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 CCDC178Q5BJE1 867 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 TOGARAM2Q6ZUX3 1019 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 TMEM47Q9BQJ4 181 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 YY1AP1Q9H869 796 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 LRRC4BQ9NT99 713 aa25.45■■□□□ 1.67
MCF2L-201ENST00000261963 GNAQP50148 359 aa25.45■■□□□ 1.66
MCF2L-201ENST00000261963 ZNF444Q8N0Y2 327 aaPredicted RBP25.45■■□□□ 1.66
MCF2L-201ENST00000261963 CCDC151A5D8V7 595 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 GTPBP6O43824 516 aaPredicted RBP25.44■■□□□ 1.66
MCF2L-201ENST00000261963 LDHCP07864 332 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 CDC25AP30304 524 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 LONP1P36776 959 aaKnown RBP25.44■■□□□ 1.66
MCF2L-201ENST00000261963 AMOTL1Q8IY63 956 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 WDR24Q96S15 920 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 PYM1Q9BRP8 204 aaKnown RBP25.44■■□□□ 1.66
MCF2L-201ENST00000261963 PCDHA6Q9UN73 950 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 PCDHA8Q9Y5H6 950 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 PALM3A6NDB9 673 aaPredicted RBP25.44■■□□□ 1.66
MCF2L-201ENST00000261963 TXLNAP40222 546 aa25.44■■□□□ 1.66
MCF2L-201ENST00000261963 BRD3Q15059 726 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms