RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 UBXN2AP68543 259 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 POLA2Q14181 598 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 NCAPG2Q86XI2 1143 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 DLATP10515 647 aaKnown RBP13.33□□□□□ -0.28
COL8A1-201ENST00000261037 INPP5BP32019 993 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 ATP8A2Q9NTI2 1148 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 POLR2MP0CAP2 368 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
COL8A1-201ENST00000261037 CHRNDQ07001 517 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 RILPQ96NA2 401 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 RASSF4Q9H2L5 321 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 ANKFY1Q9P2R3 1169 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 CSADQ9Y600 493 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 TNKSO95271 1327 aa13.33□□□□□ -0.28
COL8A1-201ENST00000261037 H7C1D1 291 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 P4HA1P13674 534 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 SATB1Q01826 763 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 BIRC2Q13490 618 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 TXNDC9O14530 226 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PDE6BP35913 854 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 CERKLQ49MI3 558 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 EP400NLQ6ZTU2 488 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PALM2Q8IXS6 379 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 GSDMBQ8TAX9 411 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 ZCCHC11Q5TAX3 1644 aaKnown RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 IFNB1P01574 187 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 KRT12Q99456 494 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 HSPD1P10809 573 aaKnown RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PDE6AP16499 860 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 ATF7P17544 494 aaPredicted RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 KRT71Q3SY84 523 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 UHMK1Q8TAS1 419 aaKnown RBP13.32□□□□□ -0.28
COL8A1-201ENST00000261037 STK38LQ9Y2H1 464 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 LPXNO60711 386 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 GNA14O95837 355 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PHKG2P15735 406 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 SLC12A2P55011 1212 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 KAZNQ674X7 775 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 PNMA1Q8ND90 353 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 CHURC1Q8WUH1 139 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
COL8A1-201ENST00000261037 ADCY9O60503 1353 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 TTC36A6NLP5 189 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 ADORA1P30542 326 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 RFX1P22670 979 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 ZNF445P59923 1031 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 GABPB2Q8TAK5 448 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 DDX41Q9UJV9 622 aaKnown RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 SARNPP82979 210 aaKnown RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 PTPN21Q16825 1174 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 ADALQ6DHV7 355 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 APOL6Q9BWW8 343 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 KLRF2D3W0D1 207 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 KRIT1O00522 736 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 STAT1P42224 750 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 FANCBQ8NB91 859 aa13.31□□□□□ -0.28
COL8A1-201ENST00000261037 SYMPKQ92797 1274 aaKnown RBP13.31□□□□□ -0.28
COL8A1-201ENST00000261037 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ERVV-2B6SEH9 535 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 OR52Z1P0C646 297 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SAT1P21673 171 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ADCY8P40145 1251 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 FBXO11Q86XK2 927 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CCDC13Q8IYE1 715 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 GREM2Q9H772 168 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 TNNC2P02585 160 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CTNNA1P35221 906 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CYP4A11Q02928 519 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 NXNQ6DKJ4 435 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 TSC1Q92574 1164 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PTPRTO14522 1441 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms