RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KIF5AQ12840 1032 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 NNTQ13423 1086 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 TRIM58Q8NG06 486 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 SNX12Q9UMY4 172 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 ZNF532Q9HCE3 1301 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 PATL2C9JE40 543 aaKnown RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 CHUKO15111 745 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 COBLO75128 1261 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 CLSTN1O94985 981 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 KRT2P35908 639 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 TTMPQ5BVD1 217 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 RETREG2Q8NC44 543 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
TROAP-201ENST00000257909 LRRC1Q9BTT6 524 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 NAPBQ9H115 298 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 SUFUQ9UMX1 484 aa12.86□□□□□ -0.35
TROAP-201ENST00000257909 PDS5AQ29RF7 1337 aaKnown RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 C21orf2O43822 256 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 DNM2P50570 870 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 GIMAP7Q8NHV1 300 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 JPH2Q9BR39 696 aaPredicted RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 MYO1FO00160 1098 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 VAV2P52735 878 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 PDCLQ13371 301 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 TTC19Q6DKK2 380 aaPredicted RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 STAMQ92783 540 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 EPN3Q9H201 632 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 NHEJ1Q9H9Q4 299 aaPredicted RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 VPS54Q9P1Q0 977 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 STIM2Q9P246 746 aa12.85□□□□□ -0.35
TROAP-201ENST00000257909 DMGDHQ9UI17 866 aaKnown RBP12.85□□□□□ -0.35
TROAP-201ENST00000257909 TIAM2Q8IVF5 1701 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 TACC1O75410 805 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 PDE6AP16499 860 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 NEDD9Q14511 834 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 THAP9Q9H5L6 903 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 RCCD1A6NED2 376 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 RPN1P04843 607 aaKnown RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 TCP1P17987 556 aaKnown RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 NAP1L1P55209 391 aaKnown RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 ATP2C1P98194 919 aaPredicted RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 CDK17Q00537 523 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
TROAP-201ENST00000257909 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
TROAP-201ENST00000257909 MACROD2A1Z1Q3 448 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 NUTM2BA6NNL0 878 aaPredicted RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 NUTM2EB1AL46 878 aaPredicted RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 TRIM21P19474 475 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 LSP1P33241 339 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 PRCPP42785 496 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 SMTNP53814 917 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 ZBED6P86452 979 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 DRP2Q13474 957 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 GLE1Q53GS7 698 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 TSEN2Q8NCE0 465 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 TCRBV5S4A2TA0A5A2 114 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 SRGNP10124 158 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 CABP4P57796 275 aa12.83□□□□□ -0.36
TROAP-201ENST00000257909 IFIT5Q13325 482 aaKnown RBP12.83□□□□□ -0.36
TROAP-201ENST00000257909 SPA17Q15506 151 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms