RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TNPO2O14787 897 aaKnown RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 CAMTA2O94983 1202 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 ACTN1P12814 892 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 GCLCP48506 637 aaPredicted RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 PIK3AP1Q6ZUJ8 805 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 MMP19Q99542 508 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 DPEP1P16444 411 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 INHBEP58166 350 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 PPP2R3AQ06190 1150 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 SEPT2Q15019 361 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 TNKSO95271 1327 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 GPSM2P81274 684 aa14.96□□□□□ -0.02
PRPF38A-201ENST00000257181 FANCBQ8NB91 859 aa14.96□□□□□ -0.02
PRPF38A-201ENST00000257181 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 CCDC113Q9H0I3 377 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 COL4A3BPQ9Y5P4 624 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 CHMP2AO43633 222 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 SCP2P22307 547 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 NUP58Q9BVL2 599 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 CGNQ9P2M7 1197 aaKnown RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 BCRP11274 1271 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 ELMOD1Q8N336 334 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 ERO1AQ96HE7 468 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 ZNF830Q96NB3 372 aaPredicted RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 RIOK1Q9BRS2 568 aaKnown RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 TSPYL2Q9H2G4 693 aaPredicted RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 FKBP1AP62942 108 aaKnown RBP14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 CUL4BQ13620 913 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 LINC00116Q8NCU8 138 aa14.95□□□□□ -0.02
PRPF38A-201ENST00000257181 ADCY9O60503 1353 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 SLC26A4O43511 780 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 MECOMQ03112 1051 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TNFAIP2Q03169 654 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 SND1Q7KZF4 910 aaKnown RBP eCLIP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 METTL13Q8N6R0 699 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 ZNF512BQ96KM6 892 aaPredicted RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 ZBED2Q9BTP6 218 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TSGA10Q9BZW7 698 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 MTERF4Q7Z6M4 381 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 PNMA6FA0A0J9YX94 578 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 LIG4P49917 911 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 AK2P54819 239 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 PDZD4Q76G19 769 aaPredicted RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 JAKMIP2Q96AA8 810 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 DHX58Q96C10 678 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 ZKSCAN3Q9BRR0 538 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 UBN2Q6ZU65 1347 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 PNMA6EA0A0J9YXQ4 647 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 MRPS9P82933 396 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TBC1D16Q8TBP0 767 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 NSUN6Q8TEA1 469 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TNNQ9UQP3 1299 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 MYL1P05976 194 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 XKR9Q5GH70 373 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 CABP7Q86V35 215 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 ZHX2Q9Y6X8 837 aa14.94□□□□□ -0.02
PRPF38A-201ENST00000257181 UTYO14607 1347 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 MROH1Q8NDA8 1641 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 GOLGA6CA6NDK9 693 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 GOLGA6BA6NDN3 693 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 GOLGA6DP0CG33 693 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 MYCT1Q8N699 235 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 KLHDC4Q8TBB5 520 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 GOLGA6AQ9NYA3 693 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 STIM2Q9P246 746 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 CKAP4Q07065 602 aaKnown RBP14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 TBC1D22BQ9NU19 505 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 DDX25Q9UHL0 483 aaKnown RBP14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 PFASO15067 1338 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 AKR1B10O60218 316 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 IGHDP01880 384 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 TXKP42681 527 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 SLC10A5Q5PT55 438 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 C9orf131Q5VYM1 1079 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 RNF207Q6ZRF8 634 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 LUZP1Q86V48 1076 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 STAG1Q8WVM7 1258 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 METTL14Q9HCE5 456 aaKnown RBP14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 PRDM1O75626 825 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 STAMBPO95630 424 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 VIMP08670 466 aaKnown RBP14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 SFNP31947 248 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 MCM4P33991 863 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 E2F5Q15329 346 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 RNF34Q969K3 372 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 OSBPL3Q9H4L5 887 aa14.93□□□□□ -0.02
PRPF38A-201ENST00000257181 RIPOR2Q9Y4F9 1068 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms