RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ANTXR1Q9H6X2 564 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 SCG2P13521 617 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 TUBB4BP68371 445 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 CTAGE3PQ8IX95 158 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 EPSTI1Q96J88 318 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 NT5C3AQ9H0P0 336 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
SMARCC1-201ENST00000254480 ATP10AO60312 1499 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ATP7AQ04656 1500 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 RIOK1Q9BRS2 568 aaKnown RBP20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 M0R2C6 588 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 POLR2FP61218 127 aaKnown RBP20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 PTGDRQ13258 359 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 SEPT14Q6ZU15 432 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 GJA10Q969M2 543 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 SEPT10Q9P0V9 454 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 PPP2R5BQ15173 497 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ANKRD13CQ8N6S4 541 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 SYMPKQ92797 1274 aaKnown RBP20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 FANCLQ9NW38 375 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 CIB2O75838 187 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 CFAP221Q4G0U5 840 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ARHGEF2Q92974 986 aaKnown RBP20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 GDF11O95390 407 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 SLFN13Q68D06 897 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 NEK8Q86SG6 692 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ZNF274Q96GC6 653 aaPredicted RBP20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 FAM184BQ9ULE4 1060 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 ZNF804BA4D1E1 1349 aa20.61■□□□□ 0.89
SMARCC1-201ENST00000254480 LRRIQ4A6NIV6 560 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 LACTBP83111 547 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 Q3C1V9 767 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 SDCCAG8Q86SQ7 713 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 CCDC125Q86Z20 511 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 HOOK2Q96ED9 719 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 DDX41Q9UJV9 622 aaKnown RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 OR52Z1P0C646 297 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 IMPACTQ9P2X3 320 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 PCDHA7Q9UN72 937 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 ATF7P17544 494 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 NAA35Q5VZE5 725 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 MTMR6Q9Y217 621 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 MYCP01106 439 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 STAT1P42224 750 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 KAZNQ674X7 775 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 PPM1KQ8N3J5 372 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 CCPG1Q9ULG6 757 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 ATP2B4P23634 1241 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 TMCO4Q5TGY1 634 aa20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 ZNF526Q8TF50 670 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 GPR101Q96P66 508 aaPredicted RBP20.6■□□□□ 0.89
SMARCC1-201ENST00000254480 ZNF445P59923 1031 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 GNPTABQ3T906 1256 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 SMYD4Q8IYR2 804 aaPredicted RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 DPH5Q9H2P9 285 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 DBNLQ9UJU6 430 aaKnown RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 ADCY9O60503 1353 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 PRKAB2O43741 272 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 ZWINTO95229 277 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 MAP3K15Q6ZN16 1313 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 PCCAP05165 728 aaPredicted RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 ZNF589Q86UQ0 364 aaPredicted RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 FAM178BQ8IXR5 827 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 PDIA3P30101 505 aaKnown RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 LLGL1Q15334 1064 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 CCDC84Q86UT8 332 aaPredicted RBP20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 PCDHA1Q9Y5I3 950 aa20.59■□□□□ 0.89
SMARCC1-201ENST00000254480 GIPC1O14908 333 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 PFKFB2O60825 505 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 ATXN8OSP0DMR3 200 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 NEDD9Q14511 834 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 KRT81Q14533 505 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 RASEFQ8IZ41 740 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 ZSWIM6Q9HCJ5 1215 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 PLEKHG3A1L390 1219 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 MKRN3Q13064 507 aaKnown RBP20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 ERFEQ4G0M1 354 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 AMFRQ9UKV5 643 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 KRT71Q3SY84 523 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 STK24Q9Y6E0 443 aa20.58■□□□□ 0.89
SMARCC1-201ENST00000254480 KDM3AQ9Y4C1 1321 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 ABCC2Q92887 1545 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 ITKQ08881 620 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 AS3MTQ9HBK9 375 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 VSIG1Q86XK7 387 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 NSMCE1Q8WV22 266 aa20.58■□□□□ 0.88
SMARCC1-201ENST00000254480 SAT1P21673 171 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 SYCE1Q8N0S2 351 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 RSAD2Q8WXG1 361 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 PPP1R16BQ96T49 567 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 TMEM2Q9UHN6 1383 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 TM6SF1Q9BZW5 370 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 PDE8BO95263 885 aa20.57■□□□□ 0.88
SMARCC1-201ENST00000254480 FTOQ9C0B1 505 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms