RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 FAM160B2Q86V87 743 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
UBE4B-201ENST00000253251 CAMTA2O94983 1202 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 MMP1P03956 469 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.72■□□□□ 0.27
UBE4B-201ENST00000253251 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 NFIXQ14938 502 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 TEKT3Q9BXF9 490 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 GOLGA8HP0CJ92 632 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 MYCT1Q8N699 235 aa16.72■□□□□ 0.27
UBE4B-201ENST00000253251 KIF20BQ96Q89 1820 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 BMP3P12645 472 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 ALAS1P13196 640 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
UBE4B-201ENST00000253251 VPS16Q9H269 839 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 CDK8P49336 464 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 PTGDRQ13258 359 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
UBE4B-201ENST00000253251 TMEM179Q6ZVK1 233 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 SMCR8Q8TEV9 937 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-201ENST00000253251 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
UBE4B-201ENST00000253251 TSPYL1Q9H0U9 437 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
UBE4B-201ENST00000253251 GOLGA6L7A0A1B0GV03 622 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 ZNF408Q9H9D4 720 aa16.71■□□□□ 0.27
UBE4B-201ENST00000253251 DIXDC1Q155Q3 683 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-201ENST00000253251 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 FLOT1O75955 427 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 USP17L8P0C7I0 530 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 EZRP15311 586 aaKnown RBP16.7■□□□□ 0.26
UBE4B-201ENST00000253251 GSDMAQ96QA5 445 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.7■□□□□ 0.262e-9■■□□□ 12.9
UBE4B-201ENST00000253251 COL3A1P02461 1466 aaPredicted RBP16.7■□□□□ 0.26
UBE4B-201ENST00000253251 SLC17A8Q8NDX2 589 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 PRR16Q569H4 304 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 MYOCDQ8IZQ8 938 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
UBE4B-201ENST00000253251 HOMER2Q9NSB8 354 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
UBE4B-201ENST00000253251 NR1I2O75469 434 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 PLA2G4DQ86XP0 818 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 ARID5AQ03989 594 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 BIRC3Q13489 604 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 GPBP1Q86WP2 473 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 GOLGA1Q92805 767 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 LRRC45Q96CN5 670 aa16.69■□□□□ 0.26
UBE4B-201ENST00000253251 TECP42680 631 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 PNOCQ13519 176 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 PRKG1Q13976 671 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 EXOC3O60645 756 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 GCNT3O95395 438 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 SNX16P57768 344 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 TPH2Q8IWU9 490 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 WDR11Q9BZH6 1224 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 RGL2O15211 777 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 CCNA1P78396 465 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 ASIC2Q16515 512 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 LARSQ9P2J5 1176 aaKnown RBP16.68■□□□□ 0.26
UBE4B-201ENST00000253251 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 PDIA6Q15084 440 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 LINC00301Q8NCQ3 95 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 FAM212AQ96EL1 285 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 CDHR1Q96JP9 859 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 GUCA1BQ9UMX6 200 aa16.68■□□□□ 0.26
UBE4B-201ENST00000253251 ERCC5P28715 1186 aaPredicted RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 CRKP46108 304 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 CCDC122Q5T0U0 273 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 FAM84BQ96KN1 310 aaPredicted RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 TNFAIP3P21580 790 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 SYDE2Q5VT97 1194 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 ARL6IP4Q66PJ3 421 aaKnown RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 RAD17O75943 681 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 ASNSP08243 561 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 RESTQ13127 1097 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 PKP1Q13835 747 aa16.67■□□□□ 0.26
UBE4B-201ENST00000253251 NAP1L3Q99457 506 aaPredicted RBP16.67■□□□□ 0.26
UBE4B-201ENST00000253251 PNMA6FA0A0J9YX94 578 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 BCRP11274 1271 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms