RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 CCDC17Q96LX7 622 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 SDF4Q9BRK5 362 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 GPRC5DQ9NZD1 345 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 FRMPD2Q68DX3 1309 aaPredicted RBP26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 ATP2B1P20020 1258 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 PTPREP23469 700 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 SIAH1Q8IUQ4 282 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 ATAD5Q96QE3 1844 aa26.77■■□□□ 1.88
SYNGR3-201ENST00000248121 POLR2AP24928 1970 aaKnown RBP26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 GH2P01242 217 aa26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 PDHBP11177 359 aa26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 TYW1BQ6NUM6 668 aa26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 GPKOWQ92917 476 aaPredicted RBP eCLIP26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 TEPSINQ96N21 525 aa26.76■■□□□ 1.87
SYNGR3-201ENST00000248121 ABCB5Q2M3G0 1257 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 C11orf57Q6ZUT1 292 aaPredicted RBP26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 ADCY5O95622 1261 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 EEF2P13639 858 aaKnown RBP26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 SYKP43405 635 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 NLRP5P59047 1200 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 C9orf131Q5VYM1 1079 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 BRMS1Q9HCU9 246 aa26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 HERC5Q9UII4 1024 aaKnown RBP26.75■■□□□ 1.87
SYNGR3-201ENST00000248121 ZNF165P49910 485 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 ESPNB1AK53 854 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 KLRF2D3W0D1 207 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 HIRAP54198 1017 aaPredicted RBP26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 STX1AQ16623 288 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 SPECC1Q5M775 1068 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 TIGD1Q96MW7 591 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 KIAA1468Q9P260 1216 aa26.74■■□□□ 1.87
SYNGR3-201ENST00000248121 TRIM75PA6NK02 468 aa26.73■■□□□ 1.87
SYNGR3-201ENST00000248121 HS1BP3Q53T59 392 aa26.73■■□□□ 1.87
SYNGR3-201ENST00000248121 SH3GLB2Q9NR46 395 aa26.73■■□□□ 1.87
SYNGR3-201ENST00000248121 PARP1P09874 1014 aaKnown RBP26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 ICA1Q05084 483 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 WWC2Q6AWC2 1192 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 TMEM179Q6ZVK1 233 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 SRPRBQ9Y5M8 271 aaKnown RBP26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 MORC2Q9Y6X9 1032 aaPredicted RBP26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 H7C1D1 291 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 SNHG28P0DPA3 235 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 ANGEL2Q5VTE6 544 aaKnown RBP26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 LZTS2Q9BRK4 669 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 SPZ1Q9BXG8 430 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 UBA5Q9GZZ9 404 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 CEP131Q9UPN4 1083 aa26.72■■□□□ 1.87
SYNGR3-201ENST00000248121 MMP14P50281 582 aa26.71■■□□□ 1.87
SYNGR3-201ENST00000248121 IQCB1Q15051 598 aa26.71■■□□□ 1.87
SYNGR3-201ENST00000248121 KCNH3Q9ULD8 1083 aa26.71■■□□□ 1.87
SYNGR3-201ENST00000248121 CAVIN2O95810 425 aa26.7■■□□□ 1.87
SYNGR3-201ENST00000248121 PRAMEF18Q5VWM3 479 aa26.7■■□□□ 1.87
SYNGR3-201ENST00000248121 M0R2N6 131 aa26.7■■□□□ 1.86
SYNGR3-201ENST00000248121 PIK3AP1Q6ZUJ8 805 aa26.7■■□□□ 1.86
SYNGR3-201ENST00000248121 ZNF579Q8NAF0 562 aaKnown RBP26.7■■□□□ 1.86
SYNGR3-201ENST00000248121 KANSL2Q9H9L4 492 aa26.7■■□□□ 1.86
SYNGR3-201ENST00000248121 A0A1W2PRG0 241 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 STXBP3O00186 592 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 TNNI2P48788 182 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 TTBK2Q6IQ55 1244 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 CCDC84Q86UT8 332 aaPredicted RBP26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 DEFB129Q9H1M3 183 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 GPCPD1Q9NPB8 672 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 BARHL2Q9NY43 387 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 NYAP2Q9P242 653 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 CALML3P27482 149 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 PLCB2Q00722 1185 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 LONRF3Q496Y0 759 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 TTC38Q5R3I4 469 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 BLIDQ8IZY5 108 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 ANO10Q9NW15 660 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 GGA3Q9NZ52 723 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 NOL7Q9UMY1 257 aaKnown RBP26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 PCDHA4Q9UN74 947 aa26.69■■□□□ 1.86
SYNGR3-201ENST00000248121 RAD21O60216 631 aa26.68■■□□□ 1.86
SYNGR3-201ENST00000248121 ZNF174Q15697 407 aa26.68■■□□□ 1.86
SYNGR3-201ENST00000248121 KCTD1Q719H9 257 aa26.68■■□□□ 1.86
SYNGR3-201ENST00000248121 ZBTB21Q9ULJ3 1066 aa26.68■■□□□ 1.86
SYNGR3-201ENST00000248121 TBC1D12O60347 775 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 ECE1P42892 770 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 TNFAIP1Q13829 316 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 NBPF12Q5TAG4 269 aaPredicted RBP26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 USP49Q70CQ1 688 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 HEATR3Q7Z4Q2 680 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 CSRNP2Q9H175 543 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 FZD1Q9UP38 647 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 SMARCA1P28370 1054 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 ZNF543Q08ER8 600 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 HOMER1Q86YM7 354 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 RASGRP4Q8TDF6 673 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 MKL1Q969V6 931 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 VAT1LQ9HCJ6 419 aa26.67■■□□□ 1.86
SYNGR3-201ENST00000248121 MAP3K10Q02779 954 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 GPR162Q16538 588 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 KRBA2Q6ZNG9 492 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 ZSCAN30Q86W11 494 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 PHF20L1A8MW92 1017 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 DPCR1Q3MIW9 517 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 DLK2Q6UY11 383 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms