RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 TMCO5BA8MYB1 307 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 MRFAP1L1Q96HT8 127 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 SLFN13Q68D06 897 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 FRMD4BQ9Y2L6 1034 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 CMTR1Q8N1G2 835 aaKnown RBP17.57■□□□□ 0.4
SIN3B-201ENST00000248054 SYNE4Q8N205 404 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
SIN3B-201ENST00000248054 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
SIN3B-201ENST00000248054 PNOCQ13519 176 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 RNF187Q5TA31 235 aaPredicted RBP17.56■□□□□ 0.4
SIN3B-201ENST00000248054 CCDC51Q96ER9 411 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 KIF2CQ99661 725 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
SIN3B-201ENST00000248054 CLGNO14967 610 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 HOOK3Q86VS8 718 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 FBXO11Q86XK2 927 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 CCDC113Q9H0I3 377 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 ARHGAP6O43182 974 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 NDUFA8P51970 172 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 SMTNP53814 917 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 ERCC6LQ2NKX8 1250 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 CYP26C1Q6V0L0 522 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 IMPG2Q9BZV3 1241 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 EXOC7Q9UPT5 735 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 NCAPH2Q6IBW4 605 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
SIN3B-201ENST00000248054 CELF1Q92879 486 aaKnown RBP17.56■□□□□ 0.4
SIN3B-201ENST00000248054 ARHGEF35A5YM69 484 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 KCNQ2O43526 872 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 OAS2P29728 719 aaKnown RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 TMTC1Q8IUR5 882 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 NELFBQ8WX92 580 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 STMN4Q9H169 189 aaPredicted RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 EFCC1Q9HA90 598 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 KDM6AO15550 1401 aaPredicted RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 GNA14O95837 355 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 MYL1P05976 194 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 INF2Q27J81 1249 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 GSDMAQ96QA5 445 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 SUGT1Q9Y2Z0 365 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 NAA30Q147X3 362 aaPredicted RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 LRRC47Q8N1G4 583 aaKnown RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 CCDC155Q8N6L0 562 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 TDRD7Q8NHU6 1098 aaKnown RBP17.55■□□□□ 0.4
SIN3B-201ENST00000248054 PLCD4Q9BRC7 762 aa17.55■□□□□ 0.4
SIN3B-201ENST00000248054 DTNBO60941 627 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 PTGDRQ13258 359 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 SPTLC3Q9NUV7 552 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 ZNF609O15014 1411 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 TRMT1LQ7Z2T5 733 aaKnown RBP17.54■□□□□ 0.4
SIN3B-201ENST00000248054 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
SIN3B-201ENST00000248054 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 NSRP1Q9H0G5 558 aaKnown RBP17.54■□□□□ 0.4
SIN3B-201ENST00000248054 PI4KBQ9UBF8 816 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 RASAL2Q9UJF2 1139 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 MMP10P09238 476 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 TBC1D10CQ8IV04 446 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 NUCKS1Q9H1E3 243 aaKnown RBP17.54■□□□□ 0.4
SIN3B-201ENST00000248054 KIAA0753Q2KHM9 967 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 CD209Q9NNX6 404 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
SIN3B-201ENST00000248054 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 MYO3BQ8WXR4 1341 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 BACH1O14867 736 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 PODNQ7Z5L7 613 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 SGMS1Q86VZ5 419 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 ARFGAP2Q8N6H7 521 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 CERKQ8TCT0 537 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 CFBP00751 764 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 USH1GQ495M9 461 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 HERC4Q5GLZ8 1057 aaPredicted RBP17.53■□□□□ 0.4
SIN3B-201ENST00000248054 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.43e-6■□□□□ 9.4
SIN3B-201ENST00000248054 VPS16Q9H269 839 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 MON2Q7Z3U7 1717 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
SIN3B-201ENST00000248054 RGL2O15211 777 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 BANK1Q8NDB2 785 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 PXDNQ92626 1479 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 IKBKBO14920 756 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 POLR2MP0CAP2 368 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
SIN3B-201ENST00000248054 CDC25BP30305 580 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 BCCIPQ9P287 314 aaKnown RBP eCLIP17.53■□□□□ 0.42e-6■■■■□ 25.8
SIN3B-201ENST00000248054 PCDHA12Q9UN75 941 aa17.53■□□□□ 0.4
SIN3B-201ENST00000248054 PHACTR2O75167 634 aa17.52■□□□□ 0.4
SIN3B-201ENST00000248054 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.4
SIN3B-201ENST00000248054 NTSR2O95665 410 aa17.52■□□□□ 0.39
SIN3B-201ENST00000248054 EVCP57679 992 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms