RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.88□□□□□ -0.03
HIF3A-201ENST00000244302 GMCL1P1Q8NEA9 526 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 WASF1Q92558 559 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 CLMNQ96JQ2 1002 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 ZSCAN16Q9H4T2 348 aaPredicted RBP14.88□□□□□ -0.03
HIF3A-201ENST00000244302 ARHGEF10LQ9HCE6 1279 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 DDX49Q9Y6V7 483 aaKnown RBP14.88□□□□□ -0.03
HIF3A-201ENST00000244302 ZHX2Q9Y6X8 837 aa14.88□□□□□ -0.03
HIF3A-201ENST00000244302 TRIM75PA6NK02 468 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 BMP3P12645 472 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 PTPRAP18433 802 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 U2AF2P26368 475 aaKnown RBP eCLIP14.87□□□□□ -0.03
HIF3A-201ENST00000244302 NLRP5P59047 1200 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 MTMR2Q13614 643 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 MYSM1Q5VVJ2 828 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 RBM27Q9P2N5 1060 aaKnown RBP14.87□□□□□ -0.03
HIF3A-201ENST00000244302 MRVI1Q9Y6F6 885 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 IKQ13123 557 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-201ENST00000244302 DCAF15Q66K64 600 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 LEO1Q8WVC0 666 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-201ENST00000244302 RRP36Q96EU6 259 aaKnown RBP14.87□□□□□ -0.03
HIF3A-201ENST00000244302 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 EMILIN3Q9NT22 766 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 PITPNM2Q9BZ72 1349 aa14.87□□□□□ -0.03
HIF3A-201ENST00000244302 GNL2Q13823 731 aaKnown RBP14.86□□□□□ -0.03
HIF3A-201ENST00000244302 VGLL4Q14135 290 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 SCYL3Q8IZE3 742 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.86□□□□□ -0.03
HIF3A-201ENST00000244302 DCAF4Q8WV16 495 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 PGBD1Q96JS3 809 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 FEZ1Q99689 392 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 BARHL2Q9NY43 387 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 KRT85P78386 507 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 SUPT20HL1Q3ZLR7 823 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 GPATCH4Q5T3I0 446 aaKnown RBP14.86□□□□□ -0.03
HIF3A-201ENST00000244302 NOSTRINQ8IVI9 506 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 TRIM44Q96DX7 344 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-201ENST00000244302 GMCL1Q96IK5 515 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 LZTS2Q9BRK4 669 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 ZNF408Q9H9D4 720 aa14.86□□□□□ -0.03
HIF3A-201ENST00000244302 CCDC173Q0VFZ6 552 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 GAS2L3Q86XJ1 694 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 SPATA32Q96LK8 384 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 TMEM260Q9NX78 707 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
HIF3A-201ENST00000244302 ESPNB1AK53 854 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 NAPAP54920 295 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 MTMR8Q96EF0 704 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 PCDHB6Q9Y5E3 794 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
HIF3A-201ENST00000244302 IQCA1LA6NCM1 817 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-201ENST00000244302 KRT2P35908 639 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 HMGCS2P54868 508 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 ZNF445P59923 1031 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
HIF3A-201ENST00000244302 CDC37Q16543 378 aaPredicted RBP14.84□□□□□ -0.03
HIF3A-201ENST00000244302 USH1GQ495M9 461 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 PIK3AP1Q6ZUJ8 805 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 WNK4Q96J92 1243 aa14.84□□□□□ -0.03
HIF3A-201ENST00000244302 SEC63Q9UGP8 760 aaKnown RBP14.84□□□□□ -0.03
HIF3A-201ENST00000244302 ATAD5Q96QE3 1844 aa14.83□□□□□ -0.03
HIF3A-201ENST00000244302 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 M0R2N6 131 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 ZBTB5O15062 677 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PEX10O60683 326 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PDIA4P13667 645 aaKnown RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 SAFBQ15424 915 aaKnown RBP eCLIP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 SYDE2Q5VT97 1194 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 ANP32BQ92688 251 aaKnown RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PPP1R9BQ96SB3 815 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 FOXP1Q9H334 677 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 ELP3Q9H9T3 547 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 GOPCQ9HD26 462 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PICK1Q9NRD5 415 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 BIN2Q9UBW5 565 aaPredicted RBP14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PCDHA6Q9UN73 950 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PCDHA8Q9Y5H6 950 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 SMARCA1P28370 1054 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 UBE2SQ16763 222 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 ZNF280CQ8ND82 737 aa14.83□□□□□ -0.04
HIF3A-201ENST00000244302 XBP1P17861 261 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 VCAM1P19320 739 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 BACE1P56817 501 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 GRIN1Q05586 938 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms