RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 RNF20Q5VTR2 975 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 BTNL9Q6UXG8 535 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 CCAR1Q8IX12 1150 aaKnown RBP12.48□□□□□ -0.41
PFDN5-201ENST00000243040 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 KIFC2Q96AC6 838 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 ZNF333Q96JL9 665 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 MTA3Q9BTC8 594 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 MROH8Q9H579 483 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
PFDN5-201ENST00000243040 SLC15A5A6NIM6 579 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 CCDC85CA6NKD9 419 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 ADCY3O60266 1144 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 ERCC3P19447 782 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 STAT3P40763 770 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 RGS2P41220 211 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 ANTXR2P58335 489 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 CCDC96Q2M329 555 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 TSGA10IPQ3SY00 556 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 GPATCH4Q5T3I0 446 aaKnown RBP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 IFIT1BQ5T764 474 aaKnown RBP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 ABRAQ8N0Z2 381 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 APBA2Q99767 749 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 TEX13BQ9BXU2 312 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 CWC22Q9HCG8 908 aaKnown RBP12.47□□□□□ -0.41
PFDN5-201ENST00000243040 IVNS1ABPQ9Y6Y0 642 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 SMCHD1A6NHR9 2005 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 LCTP09848 1927 aa12.47□□□□□ -0.41
PFDN5-201ENST00000243040 STRNO43815 780 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 ZBED4O75132 1171 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 REC8O95072 547 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 HOXC6P09630 235 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 PLS1Q14651 629 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.41
PFDN5-201ENST00000243040 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
PFDN5-201ENST00000243040 SH3TC2Q8TF17 1288 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 KCNB2Q92953 911 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 RANBP17Q9H2T7 1088 aaKnown RBP12.46□□□□□ -0.41
PFDN5-201ENST00000243040 PRR12Q9ULL5 1215 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.41
PFDN5-201ENST00000243040 MTMR7Q9Y216 660 aa12.46□□□□□ -0.41
PFDN5-201ENST00000243040 ZNF536O15090 1300 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-201ENST00000243040 ERICH2A1L162 156 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 IFIT3O14879 490 aaKnown RBP12.45□□□□□ -0.42
PFDN5-201ENST00000243040 UBXN2AP68543 259 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-201ENST00000243040 WTAPQ15007 396 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 SNRNP48Q6IEG0 339 aaKnown RBP12.45□□□□□ -0.42
PFDN5-201ENST00000243040 TRIB2Q92519 343 aa12.45□□□□□ -0.42
PFDN5-201ENST00000243040 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-201ENST00000243040 WDR19Q8NEZ3 1342 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 HMGCRP04035 888 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 INHAP05111 366 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 ELNP15502 786 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 CYP2B6P20813 491 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 ADORA2AP29274 412 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 MCM5P33992 734 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 HSPA4P34932 840 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 KRT32Q14532 448 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 CHMP4CQ96CF2 233 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 RAVER2Q9HCJ3 691 aaKnown RBP12.44□□□□□ -0.42
PFDN5-201ENST00000243040 RIPK3Q9Y572 518 aa12.44□□□□□ -0.42
PFDN5-201ENST00000243040 KIAA0100Q14667 2235 aaKnown RBP12.43□□□□□ -0.42
PFDN5-201ENST00000243040 LRRC37A2A6NM11 1700 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-201ENST00000243040 PRC1O43663 620 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 IGHA2P01877 340 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 FCER1AP12319 257 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-201ENST00000243040 SLC16A2P36021 539 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-201ENST00000243040 TKFCQ3LXA3 575 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 MAP3K21Q5TCX8 1036 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 CHST13Q8NET6 341 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 NEK1Q96PY6 1258 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 MMP19Q99542 508 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 LY9Q9HBG7 655 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
PFDN5-201ENST00000243040 CAPN15O75808 1086 aa12.42□□□□□ -0.42
PFDN5-201ENST00000243040 ICAM1P05362 532 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms