RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MX1P20591 662 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
CXCR4-201ENST00000241393 PRRT3Q5FWE3 981 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 AKAP4Q5JQC9 854 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 SREK1Q8WXA9 508 aaKnown RBP9.49□□□□□ -0.89
CXCR4-201ENST00000241393 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 ACBD3Q9H3P7 528 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 ADAMTSL3P82987 1691 aa9.49□□□□□ -0.89
CXCR4-201ENST00000241393 GSTP1P09211 210 aaKnown RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 MCCP23508 829 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 TRIM28Q13263 835 aaKnown RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 TXNDC11Q6PKC3 985 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 PLEKHG2Q9H7P9 1386 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 TRIM37O94972 964 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 BPNT1O95861 308 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 RACK1P63244 317 aaKnown RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 CAMK2GQ13555 558 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 COL9A2Q14055 689 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 HSP90AB4PQ58FF6 505 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 NBPF6Q5VWK0 638 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 TRIM42Q8IWZ5 723 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 GPRASP2Q96D09 838 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 LTV1Q96GA3 475 aaPredicted RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 RHOVQ96L33 236 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 NBPF4Q96M43 638 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 TRIM56Q9BRZ2 755 aaKnown RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 EXOC6BQ9Y2D4 811 aa9.48□□□□□ -0.89
CXCR4-201ENST00000241393 LRRFIP2Q9Y608 721 aaKnown RBP9.48□□□□□ -0.89
CXCR4-201ENST00000241393 PAGE1O75459 146 aa9.47□□□□□ -0.89
CXCR4-201ENST00000241393 INSM1Q01101 510 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-201ENST00000241393 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
CXCR4-201ENST00000241393 ARHGEF25Q86VW2 580 aa9.47□□□□□ -0.89
CXCR4-201ENST00000241393 BEND7Q8N7W2 519 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-201ENST00000241393 ZNF296Q8WUU4 475 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-201ENST00000241393 KCNB2Q92953 911 aa9.47□□□□□ -0.89
CXCR4-201ENST00000241393 ACSBG1Q96GR2 724 aa9.47□□□□□ -0.89
CXCR4-201ENST00000241393 NPHP4O75161 1426 aaPredicted RBP9.47□□□□□ -0.89
CXCR4-201ENST00000241393 BAG4O95429 457 aaKnown RBP9.46□□□□□ -0.89
CXCR4-201ENST00000241393 PF4P02776 101 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 BMP6P22004 513 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 CHMLP26374 656 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 ARID5AQ03989 594 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 TEFQ10587 303 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 SETDB1Q15047 1291 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 KLHL40Q2TBA0 621 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 FBXO11Q86XK2 927 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 DNAAF4Q8WXU2 420 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 DRC1Q96MC2 740 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 KCNQ5Q9NR82 932 aa9.46□□□□□ -0.89
CXCR4-201ENST00000241393 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
CXCR4-201ENST00000241393 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
CXCR4-201ENST00000241393 KIF1AQ12756 1690 aa9.46□□□□□ -0.9
CXCR4-201ENST00000241393 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 GJA8P48165 433 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 PAK2Q13177 524 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 MTX1Q13505 466 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ZNF530Q6P9A1 599 aaPredicted RBP9.45□□□□□ -0.9
CXCR4-201ENST00000241393 GOLM1Q8NBJ4 401 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 TINF2Q9BSI4 451 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 GRPEL1Q9HAV7 217 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 TLR6Q9Y2C9 796 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ADAMTS7Q9UKP4 1686 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 GCP02774 474 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 TFE3P19532 575 aaPredicted RBP9.45□□□□□ -0.9
CXCR4-201ENST00000241393 CUL4AQ13619 759 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 KLHDC7BQ96G42 594 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
CXCR4-201ENST00000241393 DBF4Q9UBU7 674 aaPredicted RBP9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
CXCR4-201ENST00000241393 ABCC6O95255 1503 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 A0A0A0MRY4 1105 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 BTBD11A6QL63 1104 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 RNMTO43148 476 aaKnown RBP9.44□□□□□ -0.9
CXCR4-201ENST00000241393 MAOBP27338 520 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 ZNF252P-AS1Q0IIN9 211 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 APOBRQ0VD83 1088 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 C1orf141Q5JVX7 400 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 MAP1SQ66K74 1059 aaPredicted RBP9.44□□□□□ -0.9
CXCR4-201ENST00000241393 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
CXCR4-201ENST00000241393 SEC16BQ96JE7 1060 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
CXCR4-201ENST00000241393 PHAXQ9H814 394 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms