RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 FAM160B2Q86V87 743 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 CCDC82Q8N4S0 544 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 NECAB1Q8N987 351 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 KIFC2Q96AC6 838 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 NCOA5Q9HCD5 579 aaKnown RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
HMGCL-201ENST00000235958 ADAMTS5Q9UNA0 930 aa11.84□□□□□ -0.51
HMGCL-201ENST00000235958 SMCHD1A6NHR9 2005 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 TRPA1O75762 1119 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 LARGE1O95461 756 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 SMARCA1P28370 1054 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 MCM2P49736 904 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 HERVK_113P62684 666 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 SYDE2Q5VT97 1194 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 ADGRF4Q8IZF3 695 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 SRBD1Q8N5C6 995 aaKnown RBP11.83□□□□□ -0.52
HMGCL-201ENST00000235958 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 RIOX1Q9H6W3 641 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 JMJD4Q9H9V9 463 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
HMGCL-201ENST00000235958 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 RLFQ13129 1914 aa11.83□□□□□ -0.52
HMGCL-201ENST00000235958 LOC285556D6RIA3 1793 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-201ENST00000235958 VWA5AO00534 786 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 CA12O43570 354 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 CYTH3O43739 400 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 SNAP25P60880 206 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 SCRN1Q12765 414 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-201ENST00000235958 NTRK3Q16288 839 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 TMTC3Q6ZXV5 915 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 SMCR8Q8TEV9 937 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-201ENST00000235958 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 R3HDMLQ9H3Y0 253 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 ZFYVE28Q9HCC9 887 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 RNF186Q9NXI6 227 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 V9GY48 417 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-201ENST00000235958 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
HMGCL-201ENST00000235958 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
HMGCL-201ENST00000235958 PEX10O60683 326 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 ZBED4O75132 1171 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 FDX1P10109 184 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 GCLCP48506 637 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-201ENST00000235958 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-201ENST00000235958 FUT2Q10981 343 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 CRHR2Q13324 411 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 Q3C1V9 767 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 LBX2Q6XYB7 198 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 PIBF1Q8WXW3 757 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 SNX21Q969T3 373 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 PARK7Q99497 189 aaKnown RBP11.81□□□□□ -0.52
HMGCL-201ENST00000235958 SPZ1Q9BXG8 430 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 SLC38A10Q9HBR0 1119 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-201ENST00000235958 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
HMGCL-201ENST00000235958 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 CPLX1O14810 134 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 TLR2O60603 784 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 DTNBO60941 627 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 IFNAR1P17181 557 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 TMEM132BQ14DG7 1078 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 C17orf99Q6UX52 265 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 CPXCR1Q8N123 301 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 MTMR8Q96EF0 704 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-201ENST00000235958 PCNTO95613 3336 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 MYH6P13533 1939 aa11.8□□□□□ -0.52
HMGCL-201ENST00000235958 NID2Q14112 1375 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 PARP14Q460N5 1801 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 PNMA6FA0A0J9YX94 578 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 CNMDO75829 334 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 CTDNEP1O95476 244 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 SLC4A3P48751 1232 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 SSRP1Q08945 709 aaKnown RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms