RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 PDHBP11177 359 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 PTGDRQ13258 359 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 NCAPHQ15003 741 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 NT5DC1Q5TFE4 455 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 SPC24Q8NBT2 197 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 CCDC148Q8NFR7 591 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 TTC12Q9H892 705 aaPredicted RBP18.23■□□□□ 0.51
ITGA4-201ENST00000233573 SERTAD1Q9UHV2 236 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 PCDHA6Q9UN73 950 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 PCDHA8Q9Y5H6 950 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
ITGA4-201ENST00000233573 A0A087X0B3 334 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 CLRN2A0PK11 232 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
ITGA4-201ENST00000233573 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
ITGA4-201ENST00000233573 CLEC10AQ8IUN9 316 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
ITGA4-201ENST00000233573 C4orf32Q8N8J7 132 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 JDP2Q8WYK2 163 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 MRFAP1L1Q96HT8 127 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 KCNF1Q9H3M0 494 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 DNAJC18Q9H819 358 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 TPM3P06753 285 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 SARSP49591 514 aaKnown RBP18.22■□□□□ 0.51
ITGA4-201ENST00000233573 HEATR3Q7Z4Q2 680 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 EPSTI1Q96J88 318 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 ZMYND12Q9H0C1 365 aa18.22■□□□□ 0.51
ITGA4-201ENST00000233573 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 POSTNQ15063 836 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 IL17AQ16552 155 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 RASGRP4Q8TDF6 673 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 SYMPKQ92797 1274 aaKnown RBP18.21■□□□□ 0.51
ITGA4-201ENST00000233573 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 MYH4Q9Y623 1939 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 TTLL1O95922 423 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 BMP6P22004 513 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 SHROOM1Q2M3G4 852 aaPredicted RBP18.21■□□□□ 0.51
ITGA4-201ENST00000233573 CIAPIN1Q6FI81 312 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 SPATA20Q8TB22 786 aa18.21■□□□□ 0.51
ITGA4-201ENST00000233573 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 IKBKBO14920 756 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
ITGA4-201ENST00000233573 DLGAP5Q15398 846 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 RRP36Q96EU6 259 aaKnown RBP18.2■□□□□ 0.5
ITGA4-201ENST00000233573 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
ITGA4-201ENST00000233573 SPON1Q9HCB6 807 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 HDAC9Q9UKV0 1011 aa18.2■□□□□ 0.5
ITGA4-201ENST00000233573 MCM7P33993 719 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 ASPRV1Q53RT3 343 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 ARL6IP4Q66PJ3 421 aaKnown RBP18.19■□□□□ 0.5
ITGA4-201ENST00000233573 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 SH3RF1Q7Z6J0 888 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
ITGA4-201ENST00000233573 PDILTQ8N807 584 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 PIGSQ96S52 555 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 HSD3B7Q9H2F3 369 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 HOOK1Q9UJC3 728 aaKnown RBP18.19■□□□□ 0.5
ITGA4-201ENST00000233573 VWA3AA6NCI4 1184 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 AGBL3Q8NEM8 1001 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 UBA5Q9GZZ9 404 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
ITGA4-201ENST00000233573 OFD1O75665 1012 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 PTGS1P23219 599 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 CCDC17Q96LX7 622 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 ZNF70Q9UC06 446 aaPredicted RBP18.18■□□□□ 0.5
ITGA4-201ENST00000233573 NRBP1Q9UHY1 535 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 MAN1B1Q9UKM7 699 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 FRMPD2Q68DX3 1309 aaPredicted RBP18.18■□□□□ 0.5
ITGA4-201ENST00000233573 GRAMD1CQ8IYS0 662 aa18.18■□□□□ 0.5
ITGA4-201ENST00000233573 CCDC12Q8WUD4 166 aaPredicted RBP18.18■□□□□ 0.5
ITGA4-201ENST00000233573 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
ITGA4-201ENST00000233573 LTBP3Q9NS15 1303 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 ESYT2A0FGR8 921 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 MPHOSPH10O00566 681 aaKnown RBP18.17■□□□□ 0.5
ITGA4-201ENST00000233573 NAPAP54920 295 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 ZNF543Q08ER8 600 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 MORC3Q14149 939 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 E2F4Q16254 413 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 CCDC186Q7Z3E2 898 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 HOMER1Q86YM7 354 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 ZNF713Q8N859 430 aaPredicted RBP18.17■□□□□ 0.5
ITGA4-201ENST00000233573 DHX58Q96C10 678 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 VEZTQ9HBM0 779 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 PI4KBQ9UBF8 816 aa18.17■□□□□ 0.5
ITGA4-201ENST00000233573 SEC63Q9UGP8 760 aaKnown RBP18.17■□□□□ 0.5
ITGA4-201ENST00000233573 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
ITGA4-201ENST00000233573 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 EGFRP00533 1210 aa18.16■□□□□ 0.5
ITGA4-201ENST00000233573 INF2Q27J81 1249 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms