RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CREB3L3Q68CJ9 461 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 RIOX2Q8IUF8 465 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
VEGFA-201ENST00000230480 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 PDE4DIPQ5VU43 2346 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 TNKSO95271 1327 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-201ENST00000230480 HOXC6P09630 235 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 CYP2B6P20813 491 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 SLC16A2P36021 539 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 STAT3P40763 770 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-201ENST00000230480 COA7Q96BR5 231 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 PRR12Q9ULL5 1215 aa16.17■□□□□ 0.18
VEGFA-201ENST00000230480 SLC15A5A6NIM6 579 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 XRCC5P13010 732 aaKnown RBP16.16■□□□□ 0.18
VEGFA-201ENST00000230480 SLC1A4P43007 532 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 MAP2K5Q13163 448 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 ADCK5Q3MIX3 580 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 SLC9C1Q4G0N8 1177 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 MAP3K21Q5TCX8 1036 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 RAET1EQ8TD07 263 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 DCAF4Q8WV16 495 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 KIFC2Q96AC6 838 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 FGD4Q96M96 766 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 KRT23Q9C075 422 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
VEGFA-201ENST00000230480 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 MTMR7Q9Y216 660 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 MCM3APO60318 1980 aa16.16■□□□□ 0.18
VEGFA-201ENST00000230480 FRMPD2Q68DX3 1309 aaPredicted RBP16.16■□□□□ 0.18
VEGFA-201ENST00000230480 MKI67P46013 3256 aaKnown RBP16.15■□□□□ 0.18
VEGFA-201ENST00000230480 MYCP01106 439 aaPredicted RBP16.15■□□□□ 0.18
VEGFA-201ENST00000230480 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 NT5C2P49902 561 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 TSGA10IPQ3SY00 556 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.185e-6■□□□□ 9.9
VEGFA-201ENST00000230480 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 AGBL1Q96MI9 1066 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 UNC93B1Q9H1C4 597 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 GPCPD1Q9NPB8 672 aa16.15■□□□□ 0.18
VEGFA-201ENST00000230480 INHAP05111 366 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.17
VEGFA-201ENST00000230480 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 STAG2Q8N3U4 1231 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 TRPV1Q8NER1 839 aa16.14■□□□□ 0.17
VEGFA-201ENST00000230480 DNAJC25-GNG10A0A024R161 153 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 ADORA2AP29274 412 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 STAT2P52630 851 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 CCNA1P78396 465 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
VEGFA-201ENST00000230480 TROAPQ12815 778 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 PLS1Q14651 629 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 FAM160B2Q86V87 743 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 NCAPG2Q86XI2 1143 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 CPXCR1Q8N123 301 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 NCOA7Q8NI08 942 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 UBA5Q9GZZ9 404 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
VEGFA-201ENST00000230480 MROH8Q9H579 483 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 ASTN1O14525 1302 aa16.13■□□□□ 0.17
VEGFA-201ENST00000230480 PGK2P07205 417 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 CCL5P13501 91 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 MNX1P50219 401 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-201ENST00000230480 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-201ENST00000230480 ZNF792Q3KQV3 632 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 SNRNP48Q6IEG0 339 aaKnown RBP16.12■□□□□ 0.17
VEGFA-201ENST00000230480 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 CHURC1Q8WUH1 139 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 SOCS4Q8WXH5 440 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 TEX13BQ9BXU2 312 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 LY9Q9HBG7 655 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
VEGFA-201ENST00000230480 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
VEGFA-201ENST00000230480 MYH6P13533 1939 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
VEGFA-201ENST00000230480 STRNO43815 780 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 SLC25A27O95847 323 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 HSPA4P34932 840 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 RGS2P41220 211 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 OAZ1P54368 228 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
VEGFA-201ENST00000230480 ABRAQ8N0Z2 381 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms