RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 CALML4Q96GE6 196 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 RAB34Q9BZG1 259 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 SUGCTQ9HAC7 445 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 NUB1Q9Y5A7 615 aa11.81□□□□□ -0.52
VPS18-201ENST00000220509 STRCP1A6NGW2 1772 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 TMEM232C9JQI7 657 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 KIF5CO60282 957 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 VEZTQ9HBM0 779 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 CUTAO60888 179 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 TNNI2P48788 182 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 NOSTRINQ8IVI9 506 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
VPS18-201ENST00000220509 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 ZNF609O15014 1411 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 ERCC3P19447 782 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 WDR24Q96S15 920 aa11.8□□□□□ -0.52
VPS18-201ENST00000220509 CDC25BP30305 580 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 CC2D1AQ6P1N0 951 aaPredicted RBP11.79□□□□□ -0.52
VPS18-201ENST00000220509 BARGINQ6ZT62 677 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 UIMC1Q96RL1 719 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 FANCLQ9NW38 375 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 PPP2R2CQ9Y2T4 447 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 RPS6KA4O75676 772 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
VPS18-201ENST00000220509 ASIC1P78348 528 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 DTHD1Q6ZMT9 781 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 IQUBQ8NA54 791 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 RCOR1Q9UKL0 485 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 UTRNP46939 3433 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 EFCAB8A8MWE9 144 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 TTC38Q5R3I4 469 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 DPF2Q92785 391 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 MIEF2Q96C03 454 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
VPS18-201ENST00000220509 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
VPS18-201ENST00000220509 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
VPS18-201ENST00000220509 SASH3O75995 380 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 DNA2P51530 1060 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 NR5A1Q13285 461 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 CAPZA3Q96KX2 299 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 ARPC5LQ9BPX5 153 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 NFE2L3Q9Y4A8 694 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 CSF1RP07333 972 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 RANBP1P43487 201 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 LIG3P49916 1009 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 SNX1Q13596 522 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 N4BP2L2Q92802 583 aaPredicted RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 FAM107BQ9H098 131 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 RANBP17Q9H2T7 1088 aaKnown RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 RTEL1Q9NZ71 1219 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 PLCG2P16885 1265 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 ACTN2P35609 894 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 MFSD14BQ5SR56 506 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 RRP36Q96EU6 259 aaKnown RBP11.78□□□□□ -0.52
VPS18-201ENST00000220509 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 IMPACTQ9P2X3 320 aa11.78□□□□□ -0.52
VPS18-201ENST00000220509 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
VPS18-201ENST00000220509 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.52
VPS18-201ENST00000220509 COBLO75128 1261 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 ZMYND10O75800 440 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 GOLGA8HP0CJ92 632 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 NLRP12P59046 1061 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 GTF2IP78347 998 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 FOXR1Q6PIV2 292 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 SARM1Q6SZW1 724 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 GOLGA5Q8TBA6 731 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 EXOC1Q9NV70 894 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 NARFQ9UHQ1 456 aa11.77□□□□□ -0.52
VPS18-201ENST00000220509 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 PSDA5PKW4 1024 aaPredicted RBP11.77□□□□□ -0.53
VPS18-201ENST00000220509 IVLP07476 585 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 NEFHP12036 1026 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 CCDC15Q0P6D6 951 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 CYB5R4Q7L1T6 521 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 CACNA2D4Q7Z3S7 1137 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 GPIHBP1Q8IV16 184 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 SDR16C5Q8N3Y7 309 aa11.77□□□□□ -0.53
VPS18-201ENST00000220509 RBM17Q96I25 401 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms