RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 KIAA0355O15063 1070 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 NDUFB10O96000 172 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 EPHB4P54760 987 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 SMAD3P84022 425 aaKnown RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 MAMDC4Q6UXC1 1216 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.87■□□□□ 0.61
NME3-201ENST00000219302 KBTBD3Q8NAB2 608 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 PRPF38AQ8NAV1 312 aaKnown RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 MKL1Q969V6 931 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 LENG1Q96BZ8 264 aaPredicted RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 CDX2Q99626 313 aaPredicted RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 TSEN34Q9BSV6 310 aaKnown RBP18.87■□□□□ 0.61
NME3-201ENST00000219302 MKNK2Q9HBH9 465 aa18.87■□□□□ 0.61
NME3-201ENST00000219302 PLXNA1Q9UIW2 1896 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 MINDY4BA8MYZ0 360 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 CLTBP09497 229 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 CCSAPQ6IQ19 270 aaPredicted RBP18.86■□□□□ 0.61
NME3-201ENST00000219302 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 APPBP2Q92624 585 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 COL25A1Q9BXS0 654 aaPredicted RBP18.86■□□□□ 0.61
NME3-201ENST00000219302 TTYH1Q9H313 450 aaPredicted RBP18.86■□□□□ 0.61
NME3-201ENST00000219302 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 CLIP2Q9UDT6 1046 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 CNPY2Q9Y2B0 182 aa18.86■□□□□ 0.61
NME3-201ENST00000219302 SYNGAP1Q96PV0 1343 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 RNF113AO15541 343 aaKnown RBP18.85■□□□□ 0.61
NME3-201ENST00000219302 SNRNP48Q6IEG0 339 aaKnown RBP18.85■□□□□ 0.61
NME3-201ENST00000219302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.85■□□□□ 0.61
NME3-201ENST00000219302 ANKRD33Q7Z3H0 272 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 DDX11Q96FC9 970 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 TOX2Q96NM4 488 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 EPB41L4AQ9HCS5 686 aaPredicted RBP18.85■□□□□ 0.61
NME3-201ENST00000219302 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 EYSQ5T1H1 3165 aa18.85■□□□□ 0.61
NME3-201ENST00000219302 ACLYP53396 1101 aa18.84■□□□□ 0.61
NME3-201ENST00000219302 FAAP100Q0VG06 881 aa18.84■□□□□ 0.61
NME3-201ENST00000219302 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
NME3-201ENST00000219302 FGD4Q96M96 766 aa18.84■□□□□ 0.61
NME3-201ENST00000219302 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
NME3-201ENST00000219302 PRUNE2Q8WUY3 3088 aa18.84■□□□□ 0.61
NME3-201ENST00000219302 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
NME3-201ENST00000219302 GPAA1O43292 621 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 PQBP1O60828 265 aaKnown RBP18.83■□□□□ 0.6
NME3-201ENST00000219302 KCNA10Q16322 511 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 TSHZ3Q63HK5 1081 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 CPXCR1Q8N123 301 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 RAVER2Q9HCJ3 691 aaKnown RBP18.83■□□□□ 0.6
NME3-201ENST00000219302 MTMR4Q9NYA4 1195 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 SYNPO2Q9UMS6 1093 aa18.83■□□□□ 0.6
NME3-201ENST00000219302 MOXD2PA6NHM9 499 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 PATL2C9JE40 543 aaKnown RBP18.82■□□□□ 0.6
NME3-201ENST00000219302 ZBED4O75132 1171 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 DUSP11O75319 330 aaKnown RBP18.82■□□□□ 0.6
NME3-201ENST00000219302 PRDM1O75626 825 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 ZFYP08048 801 aaPredicted RBP18.82■□□□□ 0.6
NME3-201ENST00000219302 RAG1P15918 1043 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 GNAT2P19087 354 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 IRX5P78411 483 aaPredicted RBP18.82■□□□□ 0.6
NME3-201ENST00000219302 ZNF444Q8N0Y2 327 aaPredicted RBP18.82■□□□□ 0.6
NME3-201ENST00000219302 CEP95Q96GE4 821 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 STARD7Q9NQZ5 370 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 TMEM39AQ9NV64 488 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 FEM1BQ9UK73 627 aa18.82■□□□□ 0.6
NME3-201ENST00000219302 CDH23Q9H251 3354 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 MYADML2A6NDP7 307 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 M0R2C6 588 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 ADCY6O43306 1168 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 CST5P28325 142 aaPredicted RBP18.81■□□□□ 0.6
NME3-201ENST00000219302 CDK7P50613 346 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 IFNL3Q8IZI9 196 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 GMCL1P1Q8NEA9 526 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 KIFC2Q96AC6 838 aa18.81■□□□□ 0.6
NME3-201ENST00000219302 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
NME3-201ENST00000219302 ZHX1Q9UKY1 873 aaPredicted RBP18.81■□□□□ 0.6
NME3-201ENST00000219302 VCANP13611 3396 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 TTLL1O95922 423 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 SLC4A3P48751 1232 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 TDO2P48775 406 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 OAZ1P54368 228 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 FPGSQ05932 587 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 CHST13Q8NET6 341 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 NEDD1Q8NHV4 660 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 MYLIPQ8WY64 445 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 RNPC3Q96LT9 517 aaKnown RBP18.8■□□□□ 0.6
NME3-201ENST00000219302 ABHD16BQ9H3Z7 469 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 ZNF287Q9HBT7 754 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 TBX21Q9UL17 535 aa18.8■□□□□ 0.6
NME3-201ENST00000219302 ELP1O95163 1332 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 TMEM265A0A087WTH1 108 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 DCDC2CA8MYV0 355 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 TIMP1P01033 207 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 APPP05067 770 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 ANKRD35Q8N283 1001 aa18.79■□□□□ 0.6
NME3-201ENST00000219302 MAFAQ8NHW3 353 aaPredicted RBP18.79■□□□□ 0.6
NME3-201ENST00000219302 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms