RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HPDP32754 393 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 PLCB3Q01970 1234 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ME3Q16798 604 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 KRT40Q6A162 431 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 RNF26Q9BY78 433 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 LRRC2Q9BYS8 371 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ANTXR1Q9H6X2 564 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 FAM204AQ9H8W3 233 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 IFT122Q9HBG6 1241 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 SNRKQ9NRH2 765 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 ATP8A2Q9NTI2 1148 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 STK17AQ9UEE5 414 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DDX41Q9UJV9 622 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 MYH8P13535 1937 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 FOXO3O43524 673 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 GCFC2P16383 781 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 GAP43P17677 238 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 STAT1P42224 750 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 DIS3L2Q8IYB7 885 aaKnown RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 GPT2Q8TD30 523 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 PLEKHF1Q96S99 279 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.86□□□□□ -1.63
CHD9-201ENST00000219084 PFKFB1P16118 471 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 GPTP24298 496 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 RIC8AQ9NPQ8 531 aa4.86□□□□□ -1.63
CHD9-201ENST00000219084 NEURL1BA8MQ27 555 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 NR1I2O75469 434 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 DNAJC8O75937 253 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 U2AF2P26368 475 aaKnown RBP eCLIP4.85□□□□□ -1.632e-6■■■■□ 21.8
CHD9-201ENST00000219084 MTX1Q13505 466 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 UBE3CQ15386 1083 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 AOC3Q16853 763 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 FBXO31Q5XUX0 539 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 ARL6IP4Q66PJ3 421 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 OTUD6AQ7L8S5 288 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 GBP5Q96PP8 586 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ZSCAN10Q96SZ4 725 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 MTMR6Q9Y217 621 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 STK36Q9NRP7 1315 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 TULP4Q9NRJ4 1543 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 TMEM2Q9UHN6 1383 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 DRP2Q13474 957 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 KRT39Q6A163 491 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 PDZD4Q76G19 769 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 CCDC125Q86Z20 511 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 TSPYL6Q8N831 410 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ZNF579Q8NAF0 562 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 CCT6BQ92526 530 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 LARP6Q9BRS8 491 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 THAP9Q9H5L6 903 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 VAT1LQ9HCJ6 419 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 NIP7Q9Y221 180 aaKnown RBP eCLIP4.85□□□□□ -1.63
CHD9-201ENST00000219084 EIF3DO15371 548 aaKnown RBP eCLIP4.85□□□□□ -1.639e-7■□□□□ 9.6
CHD9-201ENST00000219084 STMN1P16949 149 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 MAGEA1P43355 309 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 TPD52P55327 224 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 ARID5AQ03989 594 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 TMC4Q7Z404 712 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 CCDC25Q86WR0 208 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ALKQ9UM73 1620 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 GOLGA8CPA6NN73 597 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ITGA6P23229 1130 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 MRPS9P82933 396 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 SLC39A14Q15043 492 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ANKRD20A3Q5VUR7 823 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 SRRM1Q8IYB3 904 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 MYOCDQ8IZQ8 938 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 NFATC2IPQ8NCF5 419 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 EPS15L1Q9UBC2 864 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 DLG5Q8TDM6 1919 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ARHGEF35A5YM69 484 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 GIPC1O14908 333 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ERCC3P19447 782 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 BIRC3Q13489 604 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 KRT71Q3SY84 523 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 VSIG1Q86XK7 387 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 SUPT20HQ8NEM7 779 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 MAP4K1Q92918 833 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 CCDC97Q96F63 343 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 LSG1Q9H089 658 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 MRPL44Q9H9J2 332 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 COPRSQ9NQ92 184 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ZNF277Q9NRM2 450 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 FGFR1OP2Q9NVK5 253 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 PLEKHG2Q9H7P9 1386 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 USP6P35125 1406 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 A0A087WUV0 522 aaPredicted RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 PFDN6O15212 129 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 IL9RQ01113 521 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ASPHQ12797 758 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 CCDC105Q8IYK2 499 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 FBXO18Q8NFZ0 1043 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 SPTLC3Q9NUV7 552 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 LRWD1Q9UFC0 647 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 ASIC3Q9UHC3 531 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 RTCBQ9Y3I0 505 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 TARSL2A2RTX5 802 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 CAV1Q03135 178 aa4.85□□□□□ -1.63
CHD9-201ENST00000219084 RBBP5Q15291 538 aaKnown RBP4.85□□□□□ -1.63
CHD9-201ENST00000219084 MUM1Q2TAK8 710 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms