RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PYM1Q9BRP8 204 aaKnown RBP33.8■■■■□ 3
PABPN1-201ENST00000216727 PTGS1P23219 599 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 SH3RF1Q7Z6J0 888 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 HOMER1Q86YM7 354 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 DHX58Q96C10 678 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 PDGFDQ9GZP0 370 aaPredicted RBP33.8■■■■□ 3
PABPN1-201ENST00000216727 DNAJC18Q9H819 358 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 MAN1B1Q9UKM7 699 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 SIPA1L1O43166 1804 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 PRR29P0C7W0 189 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.79■■■■□ 3
PABPN1-201ENST00000216727 TTLL6Q8N841 843 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 BMP6P22004 513 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 SF3B2Q13435 895 aaKnown RBP33.79■■■■□ 3
PABPN1-201ENST00000216727 IL17AQ16552 155 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 KRT25Q7Z3Z0 450 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 UBA5Q9GZZ9 404 aa33.79■■■■□ 3
PABPN1-201ENST00000216727 SMCO2A6NFE2 343 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 YDJCA8MPS7 323 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 LONP1P36776 959 aaKnown RBP33.78■■■■□ 3
PABPN1-201ENST00000216727 CACNB3P54284 484 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 EIF6P56537 245 aaKnown RBP33.78■■■■□ 3
PABPN1-201ENST00000216727 MYL5Q02045 173 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 ZNF543Q08ER8 600 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 RTKN2Q8IZC4 609 aa33.78■■■■□ 3
PABPN1-201ENST00000216727 FRMPD2Q68DX3 1309 aaPredicted RBP33.78■■■■□ 3
PABPN1-201ENST00000216727 MORC3Q14149 939 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 CCDC93Q567U6 631 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 SOGA3Q5TF21 947 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 CLEC10AQ8IUN9 316 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 VAT1LQ9HCJ6 419 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 NRBP1Q9UHY1 535 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 DDTLA6NHG4 134 aaPredicted RBP33.77■■■■□ 3
PABPN1-201ENST00000216727 TCP10Q12799 353 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 MLKLQ8NB16 471 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 SLC16A10Q8TF71 515 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 PSMD1Q99460 953 aa33.77■■■■□ 3
PABPN1-201ENST00000216727 LAD1O00515 517 aa33.76■■■■□ 3
PABPN1-201ENST00000216727 SMC2O95347 1197 aa33.76■■■■□ 3
PABPN1-201ENST00000216727 INF2Q27J81 1249 aa33.76■■■■□ 3
PABPN1-201ENST00000216727 SH3BP5LQ7L8J4 393 aa33.76■■■■□ 3
PABPN1-201ENST00000216727 PSME4Q14997 1843 aa33.76■■■■□ 3
PABPN1-201ENST00000216727 MPHOSPH10O00566 681 aaKnown RBP33.75■■■□□ 2.99
PABPN1-201ENST00000216727 MYO1BO43795 1136 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 GPATCH4Q5T3I0 446 aaKnown RBP33.75■■■□□ 2.99
PABPN1-201ENST00000216727 GRAMD1CQ8IYS0 662 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 PAGE5Q96GU1 130 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 DACH1Q9UI36 760 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 KIAA1524Q8TCG1 905 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 HSD3B7Q9H2F3 369 aa33.75■■■□□ 2.99
PABPN1-201ENST00000216727 E2F4Q16254 413 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 TATDN1Q6P1N9 297 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 IQUBQ8NA54 791 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 ATRNL1Q5VV63 1379 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 ENTPD3O75355 529 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 NONOQ15233 471 aaKnown RBP eCLIP33.74■■■□□ 2.99
PABPN1-201ENST00000216727 MKL1Q969V6 931 aa33.74■■■□□ 2.99
PABPN1-201ENST00000216727 COL2A1P02458 1487 aaPredicted RBP33.73■■■□□ 2.99
PABPN1-201ENST00000216727 CFAP100Q494V2 611 aa33.73■■■□□ 2.99
PABPN1-201ENST00000216727 DEFB132Q7Z7B7 95 aa33.73■■■□□ 2.99
PABPN1-201ENST00000216727 MYH4Q9Y623 1939 aa33.73■■■□□ 2.99
PABPN1-201ENST00000216727 PRPHP41219 470 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 NOLC1Q14978 699 aaKnown RBP eCLIP33.72■■■□□ 2.998e-9■□□□□ 9.1
PABPN1-201ENST00000216727 CCDC144BQ3MJ40 725 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 CERKLQ49MI3 558 aaPredicted RBP33.72■■■□□ 2.99
PABPN1-201ENST00000216727 ZSCAN29Q8IWY8 852 aaPredicted RBP33.72■■■□□ 2.99
PABPN1-201ENST00000216727 SPTLC3Q9NUV7 552 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 DTHD1Q6ZMT9 781 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 KANSL2Q9H9L4 492 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 GPCPD1Q9NPB8 672 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 NYAP2Q9P242 653 aa33.72■■■□□ 2.99
PABPN1-201ENST00000216727 CT47A1Q5JQC4 288 aaPredicted RBP33.71■■■□□ 2.99
PABPN1-201ENST00000216727 KCNA3P22001 575 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 ORC2Q13416 577 aaPredicted RBP33.7■■■□□ 2.99
PABPN1-201ENST00000216727 PPP1R18Q6NYC8 613 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 REXO1Q8N1G1 1221 aaKnown RBP33.7■■■□□ 2.99
PABPN1-201ENST00000216727 GSDMAQ96QA5 445 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 TRIM34Q9BYJ4 488 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 TDRD3Q9H7E2 651 aaKnown RBP33.7■■■□□ 2.99
PABPN1-201ENST00000216727 JMJD4Q9H9V9 463 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 PYCARDQ9ULZ3 195 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 PNMA6FA0A0J9YX94 578 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 SLURP2P0DP57 97 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 LMOD1P29536 600 aaPredicted RBP33.7■■■□□ 2.99
PABPN1-201ENST00000216727 TXLNAP40222 546 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 DPYDQ12882 1025 aa33.7■■■□□ 2.99
PABPN1-201ENST00000216727 ADGRF4Q8IZF3 695 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 PRMT6Q96LA8 375 aaPredicted RBP33.69■■■□□ 2.98
PABPN1-201ENST00000216727 XPO4Q9C0E2 1151 aaKnown RBP33.69■■■□□ 2.98
PABPN1-201ENST00000216727 VPS33BQ9H267 617 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 TMEM60Q9H2L4 133 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 NEMFO60524 1076 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 AFMP43652 599 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 PDXDC2PQ6P474 469 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 RSBN1LQ6PCB5 846 aaPredicted RBP33.69■■■□□ 2.98
PABPN1-201ENST00000216727 IFNKQ9P0W0 207 aa33.69■■■□□ 2.98
PABPN1-201ENST00000216727 ATP2B2Q01814 1243 aa33.68■■■□□ 2.98
PABPN1-201ENST00000216727 NEK8Q86SG6 692 aa33.68■■■□□ 2.98
PABPN1-201ENST00000216727 MTMR8Q96EF0 704 aa33.68■■■□□ 2.98
PABPN1-201ENST00000216727 IMPACTQ9P2X3 320 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms