RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 PCDHAC2Q9Y5I4 1007 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 PLIN4Q96Q06 1357 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 USP27XA6NNY8 438 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 PDHBP11177 359 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 E2F4Q16254 413 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 APOBEC3HQ6NTF7 200 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 RRP36Q96EU6 259 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 MED15Q96RN5 788 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 BLZF1Q9H2G9 400 aa9.07□□□□□ -0.96
HMGXB4-201ENST00000216106 TMEM232C9JQI7 657 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 CACNB3P54284 484 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 DPYDQ12882 1025 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 TPD52L1Q16890 204 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 KLHL10Q6JEL2 608 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 ZMYND12Q9H0C1 365 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 TMEM60Q9H2L4 133 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 CHRNA5P30532 468 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 CRKP46108 304 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 NOVP48745 357 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 GALNT17Q6IS24 598 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 IQUBQ8NA54 791 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 MYH4Q9Y623 1939 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 SMCO2A6NFE2 343 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 PP2D1A8MPX8 630 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 CBFA2T2O43439 604 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 SFPQP23246 707 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 MYRIPQ8NFW9 859 aa9.06□□□□□ -0.96
HMGXB4-201ENST00000216106 H0YIN7 160 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 MPHOSPH10O00566 681 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 SHMT1P34896 483 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 LONP1P36776 959 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 KARSQ15046 597 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 PDXDC2PQ6P474 469 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 HHIPL2Q6UWX4 724 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 PODNQ7Z5L7 613 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 CCDC150Q8NCX0 1101 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 ENOX1Q8TC92 643 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 CCDC12Q8WUD4 166 aaPredicted RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 MTRQ99707 1265 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 SAMSN1Q9NSI8 373 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 CDK11BP21127 795 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 RXRBP28702 533 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 RBM5P52756 815 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 STX17P56962 302 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 TCP10Q12799 353 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 DTHD1Q6ZMT9 781 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 TRMT1Q9NXH9 659 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 IGKV6D-41A0A0C4DH26 115 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 FAM196BA6NMK8 535 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 ECE2O60344 883 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 TTLL1O95922 423 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 TNNT1P13805 278 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 ZNF18P17022 549 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 TXLNAP40222 546 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 CUL4BQ13620 913 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 LETM2Q2VYF4 491 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 SOGA3Q5TF21 947 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 GSDMAQ96QA5 445 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 C6orf50Q9HD87 102 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 GPCPD1Q9NPB8 672 aa9.05□□□□□ -0.96
HMGXB4-201ENST00000216106 SYNRGQ9UMZ2 1314 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 CCNT1O60563 726 aaKnown RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 HLA-DOAP06340 250 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 GNA11P29992 359 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 RASSF8Q8NHQ8 419 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 RIOX1Q9H6W3 641 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 ZNF646O15015 1829 aaPredicted RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 SIPA1L1O43166 1804 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 MYO1BO43795 1136 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 STAT6P42226 847 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 GOLGA8FQ08AF8 430 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 GOLGA8DPQ0D2H9 430 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 VSTM4Q8IW00 320 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 COA7Q96BR5 231 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 DISC1Q9NRI5 854 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 ERCC5P28715 1186 aaPredicted RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 RBM10P98175 930 aaKnown RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 NONOQ15233 471 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 AOC3Q16853 763 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 ASPRV1Q53RT3 343 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 JAKMIP3Q5VZ66 844 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 KRT25Q7Z3Z0 450 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 TSC1Q92574 1164 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 ZDHHC15Q96MV8 337 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 PLIN2Q99541 437 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 DNAJC18Q9H819 358 aa9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 GREB1LQ9C091 1923 aaPredicted RBP9.04□□□□□ -0.96
HMGXB4-201ENST00000216106 COBLO75128 1261 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 SNHG28P0DPA3 235 aa9.03□□□□□ -0.96
HMGXB4-201ENST00000216106 SMARCA1P28370 1054 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms