RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 KRT40Q6A162 431 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 LCA5Q86VQ0 697 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 MAK16Q9BXY0 300 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 CNOT10Q9H9A5 744 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 RGS12O14924 1447 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 TRPA1O75762 1119 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 IL9RQ01113 521 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 PLS1Q14651 629 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 NCAPH2Q6IBW4 605 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 ZC3H18Q86VM9 953 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 STK24Q9Y6E0 443 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 MAP3K19Q56UN5 1328 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 DEXIO95424 95 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
VCL-201ENST00000211998 SEPT2Q15019 361 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 PUM3Q15397 648 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 GEN1Q17RS7 908 aa11.46□□□□□ -0.57
VCL-201ENST00000211998 NOVA2Q9UNW9 492 aaKnown RBP11.46□□□□□ -0.57
VCL-201ENST00000211998 ESRRGP62508 458 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 CNBD1Q8NA66 436 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.58
VCL-201ENST00000211998 METTL22Q9BUU2 404 aaPredicted RBP11.46□□□□□ -0.58
VCL-201ENST00000211998 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 A0A087WWV3 80 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 MBD4O95243 580 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 PPP2R5EQ16537 467 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 KCNV2Q8TDN2 545 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 VTI1AQ96AJ9 217 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 TESK2Q96S53 571 aa11.46□□□□□ -0.58
VCL-201ENST00000211998 THAP12O43422 761 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 CMA1P23946 247 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 RBL2Q08999 1139 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 RASSF10A6NK89 507 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 GGCXP38435 758 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 DPCR1Q3MIW9 517 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
VCL-201ENST00000211998 MRPL46Q9H2W6 279 aaKnown RBP11.45□□□□□ -0.58
VCL-201ENST00000211998 TPCN1Q9ULQ1 816 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 HMGB1P1B2RPK0 211 aaPredicted RBP11.45□□□□□ -0.58
VCL-201ENST00000211998 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 ADAT2Q7Z6V5 191 aaKnown RBP11.45□□□□□ -0.58
VCL-201ENST00000211998 KIFAP3Q92845 792 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 GNPATO15228 680 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 PDE8AO60658 829 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 SPATA1Q5VX52 437 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 ANKRD13CQ8N6S4 541 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 PIP4K2CQ8TBX8 421 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 ANLNQ9NQW6 1124 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 DNAJC5BQ9UF47 199 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
VCL-201ENST00000211998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.44□□□□□ -0.58
VCL-201ENST00000211998 TADA3O75528 432 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 APOEP02649 317 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 KRT5P13647 590 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 DNM2P50570 870 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 RNASELQ05823 741 aaKnown RBP11.44□□□□□ -0.58
VCL-201ENST00000211998 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 TTC38Q5R3I4 469 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ANKRD7Q92527 254 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 HVCN1Q96D96 273 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
VCL-201ENST00000211998 FGD4Q96M96 766 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 FRMD4BQ9Y2L6 1034 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 WDR62O43379 1518 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 EHHADHQ08426 723 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 SLC30A9Q6PML9 568 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ZNF354CQ86Y25 554 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ACRBPQ8NEB7 543 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 OSBPL1AQ9BXW6 950 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.44□□□□□ -0.58
VCL-201ENST00000211998 H0Y3Z8 333 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 RCN2Q14257 317 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 NME8Q8N427 588 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 PHACTR3Q96KR7 559 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 EPC1Q9H2F5 836 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ADAMTS12P58397 1594 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
VCL-201ENST00000211998 PHKBQ93100 1093 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 ZC4H2Q9NQZ6 224 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
VCL-201ENST00000211998 IKBKBO14920 756 aa11.43□□□□□ -0.58
VCL-201ENST00000211998 KCNA6P17658 529 aa11.43□□□□□ -0.58
VCL-201ENST00000211998 ITGA6P23229 1130 aa11.43□□□□□ -0.58
VCL-201ENST00000211998 ADCY8P40145 1251 aa11.43□□□□□ -0.58
VCL-201ENST00000211998 MSH2P43246 934 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms