RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MED15Q96RN5 788 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 KIF9Q9HAQ2 790 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 LRP6O75581 1613 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 LSP1P33241 339 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 ATP1A2P50993 1020 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 ERVK-24P63145 666 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 IFT88Q13099 833 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
TMEM38A-201ENST00000187762 ATRNO75882 1429 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 MPHOSPH10O00566 681 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 SRGAP2O75044 1071 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 SSBP05455 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 PBX1P40424 430 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 RESP18Q5W5W9 173 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 VPS37DQ86XT2 251 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 CNGA4Q8IV77 575 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 MAB21L3Q8N8X9 362 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 CCDC26Q8TAB7 109 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 ITFG2Q969R8 447 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 CAPZA3Q96KX2 299 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 SAR1BQ9Y6B6 198 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 WDR19Q8NEZ3 1342 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 RPSAP08865 295 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 CKAP4Q07065 602 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 KRT40Q6A162 431 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 APTXQ7Z2E3 356 aaKnown RBP16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 MLKLQ8NB16 471 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
TMEM38A-201ENST00000187762 ZNF335Q9H4Z2 1342 aaPredicted RBP16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 GOLGA6L7A0A1B0GV03 622 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 PSMD14O00487 310 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 ATP1A1P05023 1023 aaKnown RBP16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 TTF1Q15361 905 aaPredicted RBP16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 ZNF827Q17R98 1081 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 ACTR5Q9H9F9 607 aaPredicted RBP16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 DACH1Q9UI36 760 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 GUCA1BQ9UMX6 200 aa16.58■□□□□ 0.25
TMEM38A-201ENST00000187762 CHD4Q14839 1912 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 GYPCP04921 128 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 SLC8A1P32418 973 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 CTDSPL2Q05D32 466 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 CDCA2Q69YH5 1023 aaPredicted RBP16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 SH2D3CQ8N5H7 860 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 MICAL1Q8TDZ2 1067 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 AIDAQ96BJ3 306 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 SLF1Q9BQI6 1058 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 TACC3Q9Y6A5 838 aa16.58■□□□□ 0.24
TMEM38A-201ENST00000187762 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 PPP6R2O75170 966 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 NFXL1Q6ZNB6 911 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 BORCS6Q96GS4 357 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 STRBPQ96SI9 672 aaKnown RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 EPB41L4AQ9HCS5 686 aaPredicted RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 SLIT2O94813 1529 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 PDE8AO60658 829 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 RWDD2BP57060 319 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 HDLBPQ00341 1268 aaKnown RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 C6orf89Q6UWU4 347 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 STK11IPQ8N1F8 1099 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 SPDL1Q96EA4 605 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 RNPC3Q96LT9 517 aaKnown RBP16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 RUFY1Q96T51 708 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
TMEM38A-201ENST00000187762 AP1G2O75843 785 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 GUCY1A3Q02108 690 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 PTGISQ16647 500 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 PAPD7Q5XG87 772 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 NLRP14Q86W24 1093 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 MAGEB6Q8N7X4 407 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 PARD3BQ8TEW8 1205 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 RSRC1Q96IZ7 334 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 CCT8L2Q96SF2 557 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 HINFPQ9BQA5 517 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 LY9Q9HBG7 655 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 ZBTB43O43298 467 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 MBD4O95243 580 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 NTRK3Q16288 839 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 ALS2CLQ60I27 953 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 KDM7AQ6ZMT4 941 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 CCDC121Q6ZUS5 278 aa16.56■□□□□ 0.24
TMEM38A-201ENST00000187762 TSEN2Q8NCE0 465 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms