RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PPP1R21Q6ZMI0 780 aa13.28□□□□□ -0.28
TRO-201ENST00000173898 SWAP70Q9UH65 585 aa13.28□□□□□ -0.28
TRO-201ENST00000173898 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.28
TRO-201ENST00000173898 BTDP43251 543 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 SCNN1DP51172 638 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 KIAA0825Q8IV33 1275 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 PUS7LQ9H0K6 701 aaKnown RBP13.27□□□□□ -0.28
TRO-201ENST00000173898 STK32BQ9NY57 414 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 ATP7BP35670 1465 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 E7EVH7 732 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 KCNK3O14649 394 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 COBLO75128 1261 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 ALDH1B1P30837 517 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 CASP14P31944 242 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.282e-6■■■■□ 20.9
TRO-201ENST00000173898 PTPROQ16827 1216 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 CCDC14Q49A88 953 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.27□□□□□ -0.28
TRO-201ENST00000173898 AMFRQ9UKV5 643 aa13.27□□□□□ -0.28
TRO-201ENST00000173898 ADD2P35612 726 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 IL6STP40189 918 aaPredicted RBP13.27□□□□□ -0.29
TRO-201ENST00000173898 CLUL1Q15846 466 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 MLH3Q9UHC1 1453 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 BUB1O43683 1085 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
TRO-201ENST00000173898 NR5A1Q13285 461 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 POLA2Q14181 598 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 CFAP157Q5JU67 520 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 CEP128Q6ZU80 1094 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRO-201ENST00000173898 HYOU1Q9Y4L1 999 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 SYNMO15061 1565 aa13.27□□□□□ -0.29
TRO-201ENST00000173898 PRKAB2O43741 272 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 TNNI1P19237 187 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 ATP2B4P23634 1241 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
TRO-201ENST00000173898 PRKG1Q13976 671 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 PTPN21Q16825 1174 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 ERBB3P21860 1342 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 TCP1P17987 556 aaKnown RBP13.26□□□□□ -0.29
TRO-201ENST00000173898 PPM1FP49593 454 aaPredicted RBP13.26□□□□□ -0.29
TRO-201ENST00000173898 SLC8A3P57103 927 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
TRO-201ENST00000173898 LONRF2Q1L5Z9 754 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 NLRX1Q86UT6 975 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 PPIP5K2O43314 1243 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 RASA3Q14644 834 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 SMYD4Q8IYR2 804 aaPredicted RBP13.26□□□□□ -0.29
TRO-201ENST00000173898 CARD10Q9BWT7 1032 aa13.26□□□□□ -0.29
TRO-201ENST00000173898 ADAM9Q13443 819 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 TUBGCP2Q9BSJ2 902 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 AZI2Q9H6S1 392 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 USP21Q9UK80 565 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 PCDHA1Q9Y5I3 950 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 IKBKBO14920 756 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
TRO-201ENST00000173898 GAS8O95995 478 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 CA8P35219 290 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 PSMC4P43686 418 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 CYP4A11Q02928 519 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 MTMR3Q13615 1198 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 GBP6Q6ZN66 633 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
TRO-201ENST00000173898 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
TRO-201ENST00000173898 MAP7D1Q3KQU3 841 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
TRO-201ENST00000173898 TAOK1Q7L7X3 1001 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 FAM178BQ8IXR5 827 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 GRAMD1CQ8IYS0 662 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 ZSWIM5Q9P217 1185 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 CCDC160A6NGH7 325 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 IFNAR1P17181 557 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 TRAPPC10P48553 1259 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 ZSCAN26Q16670 478 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 FBXO11Q86XK2 927 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 SUPT20HQ8NEM7 779 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 RAB3IL1Q8TBN0 382 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 AIFM3Q96NN9 605 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 IWS1Q96ST2 819 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 RAB17Q9H0T7 212 aa13.25□□□□□ -0.29
TRO-201ENST00000173898 LARSQ9P2J5 1176 aaKnown RBP13.25□□□□□ -0.29
TRO-201ENST00000173898 KRT19P08727 400 aa13.24□□□□□ -0.29
TRO-201ENST00000173898 KRT15P19012 456 aa13.24□□□□□ -0.29
TRO-201ENST00000173898 ICA1Q05084 483 aa13.24□□□□□ -0.29
TRO-201ENST00000173898 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms