RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 MYH13Q9UKX3 1938 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 PHACTR2O75167 634 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 EIF6P56537 245 aaKnown RBP9.34□□□□□ -0.91
CDC27-201ENST00000066544 ST5P78524 1137 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 NCAPH2Q6IBW4 605 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 AMIGO3Q86WK7 504 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 GDAP1L1Q96MZ0 367 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 UBA5Q9GZZ9 404 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ATP8A2Q9NTI2 1148 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
CDC27-201ENST00000066544 PARP1P09874 1014 aaKnown RBP9.33□□□□□ -0.92
CDC27-201ENST00000066544 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
CDC27-201ENST00000066544 SLC35G1Q2M3R5 365 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 GPR161Q8N6U8 529 aaKnown RBP9.33□□□□□ -0.92
CDC27-201ENST00000066544 CAPZA3Q96KX2 299 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 HDAC6Q9UBN7 1215 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 TTC26A0AVF1 554 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 CTAGE9A4FU28 777 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 JAKMIP3Q5VZ66 844 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 CYTH3O43739 400 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 ORC4O43929 436 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 KLK7P49862 253 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 LONRF2Q1L5Z9 754 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 CDC23Q9UJX2 597 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 B4DLN1 442 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 CALML3P27482 149 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 PBX1P40424 430 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 NAPAP54920 295 aa9.33□□□□□ -0.92
CDC27-201ENST00000066544 SMARCC1Q92922 1105 aaPredicted RBP9.33□□□□□ -0.92
CDC27-201ENST00000066544 ARPP21Q9UBL0 812 aaPredicted RBP9.33□□□□□ -0.92
CDC27-201ENST00000066544 RAD21O60216 631 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 ASIC1P78348 528 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 SRGAP1Q7Z6B7 1085 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 PNKPQ96T60 521 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 DISC1Q9NRI5 854 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 ZBTB22O15209 634 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 SRGAP2O75044 1071 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 ZNF658Q5TYW1 1059 aaPredicted RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 CLEC4GQ6UXB4 293 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 TPTE2Q6XPS3 522 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 RSRC2Q7L4I2 434 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 RABGGTAQ92696 567 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 DDX60Q8IY21 1712 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 NKRFO15226 690 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDC27-201ENST00000066544 CYP27A1Q02318 531 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 TSR1Q2NL82 804 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 NAALADL2Q58DX5 795 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 IRF2BP1Q8IU81 584 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 NOA1Q8NC60 698 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 PCDHA4Q9UN74 947 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 CCNT1O60563 726 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 TECP42680 631 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 TMTC1Q8IUR5 882 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 DRC1Q96MC2 740 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 TMEM47Q9BQJ4 181 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 LUC7L2Q9Y383 392 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 F8W031 263 aaPredicted RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 ZMYND10O75800 440 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 C12orf60Q5U649 245 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 LRRC15Q8TF66 581 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 FAM53CQ9NYF3 392 aa9.32□□□□□ -0.92
CDC27-201ENST00000066544 MAGEC2Q9UBF1 373 aaPredicted RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 EPN1Q9Y6I3 576 aaPredicted RBP9.32□□□□□ -0.92
CDC27-201ENST00000066544 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 PLCG1P19174 1290 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 MTIF2P46199 727 aaKnown RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 SPAG1Q07617 926 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 FCER1AP12319 257 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 PDE4DQ08499 809 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 CYP26C1Q6V0L0 522 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 KIAA1328Q86T90 577 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 AMOTL1Q8IY63 956 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 AGPAT5Q9NUQ2 364 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 LIMA1Q9UHB6 759 aaKnown RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 PCDHA6Q9UN73 950 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 PCDHA8Q9Y5H6 950 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 ANKRD36CQ5JPF3 1778 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 IDEP14735 1019 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 TXKP42681 527 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 MRPS25P82663 173 aaKnown RBP9.31□□□□□ -0.92
CDC27-201ENST00000066544 ATP2B2Q01814 1243 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 TXNRD1Q16881 649 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 RMND1Q9NWS8 449 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 MYH8P13535 1937 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 PSMA7O14818 248 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 SKIDA1Q1XH10 827 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 DYMQ7RTS9 669 aa9.31□□□□□ -0.92
CDC27-201ENST00000066544 FUT8Q9BYC5 575 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms