RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 GRIN2CQ14957 1233 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 C12orf60Q5U649 245 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 REPS2Q8NFH8 660 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 TIFAQ96CG3 184 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.26
NME1-201ENST00000013034 TBX21Q9UL17 535 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 FAM184BQ9ULE4 1060 aa13.42□□□□□ -0.26
NME1-201ENST00000013034 PRKAB2O43741 272 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 TIMP1P01033 207 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
NME1-201ENST00000013034 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.26
NME1-201ENST00000013034 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 PAG1Q9NWQ8 432 aa13.41□□□□□ -0.26
NME1-201ENST00000013034 COL11A1P12107 1806 aaPredicted RBP13.41□□□□□ -0.26
NME1-201ENST00000013034 ELP1O95163 1332 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 USP17L12C9JPN9 530 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 USP17L21D6R901 530 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
NME1-201ENST00000013034 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 ZNF467Q7Z7K2 595 aaPredicted RBP13.4□□□□□ -0.26
NME1-201ENST00000013034 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 GAS2L1Q99501 681 aaPredicted RBP13.4□□□□□ -0.26
NME1-201ENST00000013034 SLF1Q9BQI6 1058 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.4□□□□□ -0.261e-16■□□□□ 8.4
NME1-201ENST00000013034 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
NME1-201ENST00000013034 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
NME1-201ENST00000013034 PLXNA1Q9UIW2 1896 aa13.4□□□□□ -0.26
NME1-201ENST00000013034 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 DNAJC25-GNG10A0A024R161 153 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 RAD21O60216 631 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
NME1-201ENST00000013034 UBE3CQ15386 1083 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 KCNA10Q16322 511 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
NME1-201ENST00000013034 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
NME1-201ENST00000013034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
NME1-201ENST00000013034 PCSK9Q8NBP7 692 aaKnown RBP13.39□□□□□ -0.27
NME1-201ENST00000013034 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 SPC25Q9HBM1 224 aa13.39□□□□□ -0.27
NME1-201ENST00000013034 GREB1LQ9C091 1923 aaPredicted RBP13.39□□□□□ -0.27
NME1-201ENST00000013034 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
NME1-201ENST00000013034 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 HMMRO75330 724 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 SNAI1O95863 264 aaPredicted RBP13.38□□□□□ -0.27
NME1-201ENST00000013034 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 RASIP1Q5U651 963 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 TMEM199Q8N511 208 aa13.38□□□□□ -0.27
NME1-201ENST00000013034 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
NME1-201ENST00000013034 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
NME1-201ENST00000013034 MYADML2A6NDP7 307 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 APBB1O00213 710 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 TLR3O15455 904 aaKnown RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 RAB11FIP3O75154 756 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 ATP5JP18859 108 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 CDK7P50613 346 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 GJA9P57773 515 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 TMEM240Q5SV17 173 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 C20orf194Q5TEA3 1177 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 RPAP2Q8IXW5 612 aaPredicted RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 HAUS7Q99871 368 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 BOLA2Q9H3K6 86 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 ABHD16BQ9H3Z7 469 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 THEGQ9P2T0 379 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 FBXO40Q9UH90 709 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 SLC4A4Q9Y6R1 1079 aa13.37□□□□□ -0.27
NME1-201ENST00000013034 BAZ2AQ9UIF9 1905 aaKnown RBP13.37□□□□□ -0.27
NME1-201ENST00000013034 ARVCFO00192 962 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 NDUFB10O96000 172 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 ASGR1P07306 291 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 CSF2RAP15509 400 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 RAB30Q15771 203 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 SLFNL1Q499Z3 407 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 CCDC129Q6ZRS4 1044 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 FAM126BQ8IXS8 530 aa13.36□□□□□ -0.27
NME1-201ENST00000013034 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
NME1-201ENST00000013034 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.36□□□□□ -0.27
NME1-201ENST00000013034 MTIF3Q9H2K0 278 aaKnown RBP13.36□□□□□ -0.27
NME1-201ENST00000013034 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
NME1-201ENST00000013034 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
NME1-201ENST00000013034 ADCY6O43306 1168 aa13.35□□□□□ -0.27
NME1-201ENST00000013034 ZBED4O75132 1171 aa13.35□□□□□ -0.27
NME1-201ENST00000013034 COL9A1P20849 921 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms