RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 PAXBP1Q9Y5B6 917 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 CYP21A2P08686 494 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 CDK8P49336 464 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 NUP58Q9BVL2 599 aa11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
NIPAL3-201ENST00000003912 AKR1B15C9JRZ8 316 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 GNA14O95837 355 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 MTX1Q13505 466 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 ATP6V0A1Q93050 837 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 RNF34Q969K3 372 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 MAK16Q9BXY0 300 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 MCAMP43121 646 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 VPS16Q9H269 839 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 LARSQ9P2J5 1176 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CTAGE15A4D2H0 777 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CTAGE8P0CG41 777 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 POLGP54098 1239 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 NLRP12P59046 1061 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CTAGE6Q86UF2 777 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNF589Q86UQ0 364 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CTAGE4Q8IX94 777 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 BCCIPQ9P287 314 aaKnown RBP eCLIP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 LAD1O00515 517 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CCND2P30279 289 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 LIG4P49917 911 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 ADALQ6DHV7 355 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 DYNLL2Q96FJ2 89 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
NIPAL3-201ENST00000003912 CTAGE9A4FU28 777 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 BCRP11274 1271 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 TNNI1P19237 187 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 TRAPPC10P48553 1259 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 TFDP1Q14186 410 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 EPHA10Q5JZY3 1008 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 TTC14Q96N46 770 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 SORBS3O60504 671 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 FMNL1O95466 1100 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 ASIC2Q16515 512 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 KIDINS220Q9ULH0 1771 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 GPSM2P81274 684 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 LRCH2Q5VUJ6 765 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 CPDO75976 1380 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 CD163L1Q9NR16 1453 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 BTBD18B2RXH4 712 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 EXOC8Q8IYI6 725 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 IGSF22Q8N9C0 903 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 NELFBQ8WX92 580 aa11.5□□□□□ -0.57
NIPAL3-201ENST00000003912 SLC16A2P36021 539 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 RNF169Q8NCN4 708 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 ZNF577Q9BSK1 485 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 WDR11Q9BZH6 1224 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 NACA2Q9H009 215 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 NBPF26B4DH59 902 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 NBPF10Q6P3W6 841 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 OTUD6BQ8N6M0 293 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SH3RF3Q8TEJ3 882 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SLC16A10Q8TF71 515 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 TDRD3Q9H7E2 651 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SERTAD1Q9UHV2 236 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 DNAI1Q9UI46 699 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 DCCP43146 1447 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 ATF7P17544 494 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 MIS18BP1Q6P0N0 1132 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC77Q9BR77 488 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 BLZF1Q9H2G9 400 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 GUCA1BQ9UMX6 200 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 CD19P15391 556 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 KRT9P35527 623 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 MAATS1Q7Z4T9 603 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 FAM178BQ8IXR5 827 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SLC17A8Q8NDX2 589 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SREK1Q8WXA9 508 aaKnown RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 PIGSQ96S52 555 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 FOXP1Q9H334 677 aaPredicted RBP11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 K7ENM7 598 aa11.49□□□□□ -0.57
NIPAL3-201ENST00000003912 SCRN1Q12765 414 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms