RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 NppbP40753 121 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Dok7Q18PE0 504 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Klhdc9Q3USL1 350 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Smarca1Q6PGB8 1046 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Galnt17Q7TT15 598 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Ppp2r2cQ8BG02 447 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Setdb2Q8C267 713 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Fam161bQ8CB59 589 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Ccdc38Q8CDN8 563 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Hs2st1Q8R3H7 356 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Arl8aQ8VEH3 186 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Ppp2r5dQ91V89 594 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 TbcbQ9D1E6 244 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Mss51Q9D5Z5 446 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Znf287Q9EQB9 759 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Uchl5Q9WUP7 329 aa11.49□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Lekr1B2RVN1 116 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 MthfslL7N466 203 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Nr1i2O54915 431 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Msh3P13705 1091 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Tpm1P58771 284 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Eif5P59325 429 aaKnown RBP11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gja5Q01231 358 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Kcnb1Q03717 857 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Fam198bQ3UPI1 517 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Tnni3kQ5GIG6 834 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Ankrd40Q5SUE8 363 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 RragbQ6NTA4 374 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Mxd3Q80US8 206 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pcdhb5Q91XZ5 792 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 WaslQ91YD9 501 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Alpk1Q9CXB8 1231 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pcdh11xF6ZNL5 1338 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pitpnm2Q6ZPQ6 1335 aa11.48□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Armc3A2AU72 881 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pak1O88643 545 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Vcam1P29533 739 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pola2P33611 600 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Eef2P58252 858 aaKnown RBP11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Kiaa0754Q69ZZ9 979 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gpbp1Q6NXH3 473 aaKnown RBP11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Frmd3Q8BHD4 595 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Nek9Q8K1R7 984 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gys2Q8VCB3 704 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Trub2Q91WG3 331 aaKnown RBP11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pcdha7Q91Y13 937 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Xrcc4Q924T3 326 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Vstm4T1NXB5 319 aa11.47□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gm4307E9PZY4 289 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gm4312K9J7E2 289 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gna11P21278 359 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Terf1P70371 421 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gdf10P97737 476 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gucy2cQ3UWA6 1072 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Arhgef2Q60875 985 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 GnptabQ69ZN6 1235 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Rasgrp4Q8BTM9 673 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 NelfbQ8C4Y3 580 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Apol10aQ8CCA5 318 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Gtf3c5Q8R2T8 520 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 BaatQ91X34 420 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Klhl40Q9D783 621 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Inpp4aQ9EPW0 939 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Pex3Q9QXY9 372 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Homer1Q9Z2Y3 366 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Sned1Q70E20 1403 aa11.46□□□□□ -0.57
Cpsf3-211ENSMUST00000222968 Zfp646Q6NV66 1788 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Gm30191A0A0U1RNT7 187 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Ccdc191J3QQ27 883 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 EmbP21995 330 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Tbc1d2bQ3U0J8 965 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Nom1Q3UFM5 854 aaKnown RBP11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Bag1Q60739 355 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Scnn1aQ61180 699 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Ccna1Q61456 421 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Kcnj11Q61743 390 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Ovgp1Q62010 721 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Clca4aQ6Q473 924 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 SltmQ8CH25 1031 aaKnown RBP11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Cd209bQ8CJ91 325 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Onecut3Q8K557 490 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Tesk2Q8VCT9 570 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Ppp1r3gQ9CW07 347 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 RabggtaQ9JHK4 567 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Sel1lQ9Z2G6 790 aa11.46□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Myh14Q6URW6 2000 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Gm7356A0A087WSA6 508 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Chrna5Q2MKA5 467 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Kiaa0319Q5SZV5 1081 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Glra4Q61603 456 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Atp2b4Q6Q477 1205 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 KhnynQ80U38 671 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Ccdc122Q8BVN0 290 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 GlyctkQ8QZY2 523 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 CenpqQ9CPQ5 267 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Snrnp35Q9D384 244 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Mfap3lQ9D3X9 409 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Copb1Q9JIF7 953 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Plxnb2B2RXS4 1842 aa11.45□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Psme4Q5SSW2 1843 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms