RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Stat2Q9WVL2 923 aa11.83□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Zmym2Q9CU65 1376 aa11.83□□□□□ -0.52
Ptpre-208ENSMUST00000211788 MeiocA2AG06 965 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gm21969J3QJZ1 289 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ppef2O35385 757 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 DnttP09838 530 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 PrphP15331 475 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Sdc2P43407 202 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Slc7a1Q09143 622 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Rc3h1Q4VGL6 1130 aaKnown RBP11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Fxr1Q61584 677 aaKnown RBP11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Pim2Q62070 370 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Epha10Q8BYG9 1007 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Hexim1Q8R409 356 aaKnown RBP11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Chd5A2A8L1 1946 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 A0A0U1RNP2 1173 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gm15262A0A140LIQ5 728 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gucy1a2F8VQK3 730 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 DSCC1Q14AI0 399 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 VrtnQ3SYK4 740 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Glg1Q61543 1175 aaKnown RBP11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Baiap3Q80TT2 1134 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ankrd13aQ80UP5 588 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Mxd3Q80US8 206 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gga3Q8BMI3 718 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Vps53Q8CCB4 832 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gle1Q8R322 699 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Smc1bQ920F6 1248 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 UvssaQ9D479 717 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Myo1hQ9D6A1 958 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Baiap2l1Q9DBJ3 514 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Lmbr1Q9JIT0 490 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Jag1Q9QXX0 1218 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Snapc4Q8BP86 1333 aa11.82□□□□□ -0.52
Ptpre-208ENSMUST00000211788 A0A1L1SQF0 893 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Nfil3O08750 462 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Api5O35841 504 aaKnown RBP11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Kiaa1468Q148V7 1216 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tex11Q14AT2 947 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 AsnsQ61024 561 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Rassf10Q8BL43 508 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Bicdl2Q8CHW5 507 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 ParnQ8VDG3 624 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 MicalclQ9D5U9 680 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 SyncQ9EPM5 470 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Il7P10168 154 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Usp5P56399 858 aaKnown RBP11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Terf1P70371 421 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Plekha7Q3UIL6 1118 aaKnown RBP11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Armc2Q3URY6 854 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Myo19Q5SV80 963 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Nek5Q7TSC3 627 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Q8CEZ4 452 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Pde5aQ8CG03 865 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Trim29Q8R2Q0 587 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ftsj3Q9DBE9 838 aaKnown RBP11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tmem47Q9JJG6 181 aa11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Rbm6S4R1W5 1118 aaKnown RBP11.81□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Grem2O88273 168 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Impdh2P24547 514 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Eya3P97480 510 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Vars2Q3U2A8 1060 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Kiaa0319Q5SZV5 1081 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tacc1Q6Y685 774 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cdk8Q8R3L8 464 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Gtf2iQ9ESZ8 998 aaKnown RBP11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ccdc88aQ5SNZ0 1873 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Znf568E9PYI1 671 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 LtbrP50284 415 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tax1bp1Q3UKC1 814 aaKnown RBP11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Sun3Q5SS91 320 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cypt2Q6P924 180 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Spats2Q8K1N4 545 aaKnown RBP11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Calml3Q9D6P8 149 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Zcchc17Q9ESX4 241 aaKnown RBP11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ubxn8Q9QZ49 277 aa11.8□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Prdm11A2AGX3 565 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Rsrc2A2RTL5 376 aaKnown RBP11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Hnrnph1O35737 449 aaKnown RBP11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Alppl2P24823 529 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cdh15P33146 784 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Nap1l2P51860 460 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Ddx49Q4FZF3 480 aaKnown RBP11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Bag1Q60739 355 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Krt39Q6IFX4 482 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tmem60Q8K174 133 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Klc4Q9DBS5 619 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cd2apQ9JLQ0 637 aa11.79□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Tbc1d2B1AVH7 922 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 NpcdF8VQB8 469 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Hnrnph2P70333 449 aaKnown RBP11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Slc9a1Q61165 820 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 LnpkQ7TQ95 425 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Cep128Q8BI22 1102 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Fbxo18Q8K2I9 1042 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Mical1Q8VDP3 1048 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 RabggtaQ9JHK4 567 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Nek3Q9R0A5 511 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 GnaqP21279 359 aa11.78□□□□□ -0.52
Ptpre-208ENSMUST00000211788 Emc10Q3TAS6 258 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms