RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Msh3P13705 1091 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Eif5P59325 429 aaKnown RBP15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Gdf10P97737 476 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Insm1Q63ZV0 521 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Dpp8Q80YA7 892 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 SpidrQ8BGX7 933 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Mfap3Q922T2 349 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Abhd2Q9QXM0 425 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Ecm29Q6PDI5 1840 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Psme4Q5SSW2 1843 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Gm30191A0A0U1RNT7 187 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Tmem132bF7BAB2 1078 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Lilrb3P97484 841 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Tnni3kQ5GIG6 834 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Gpbp1Q6NXH3 473 aaKnown RBP15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Dusp9Q7TNL7 452 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Ift74Q8BKE9 600 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Dnm3Q8BZ98 863 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Rbm42Q91V81 474 aaKnown RBP15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 BccipQ9CWI3 316 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Itga2bQ9QUM0 1033 aa15.06■□□□□ 0
Pdlim5-208ENSMUST00000196220 Myh7bA2AQP0 1941 aa15.05■□□□□ 0
Pdlim5-208ENSMUST00000196220 Krt78E9Q0F0 1068 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 Nab2Q61127 525 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 Nap1l4Q78ZA7 375 aaKnown RBP15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 KhnynQ80U38 671 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 GlyctkQ8QZY2 523 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 Yipf1Q91VU1 306 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 Sept14Q9DA97 430 aa15.05■□□□□ -0
Pdlim5-208ENSMUST00000196220 TicrrQ8BQ33 1889 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Bpifb4A2BGH0 617 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Pak1O88643 545 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Mybl2P48972 704 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Npr3P70180 536 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Cnga2Q62398 664 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ccdc189Q6NZQ0 333 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Clca4aQ6Q473 924 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Col23a1Q8K4G2 532 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Kctd10Q922M3 315 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Homer1Q9Z2Y3 366 aa15.04■□□□□ -0
Pdlim5-208ENSMUST00000196220 Map7d1A2AJI0 846 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Slc27a3O88561 667 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Pbx1P41778 430 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Stim1P70302 685 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Chrna5Q2MKA5 467 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Tigd5Q499M4 642 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Zdhhc14Q8BQQ1 489 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Q8C6G1 249 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ushbp1Q8R370 680 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Eps8l1Q8R5F8 716 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Tc2nQ91XT6 489 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Pcdha12Q91Y18 950 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ttc5Q99LG4 440 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 CenpqQ9CPQ5 267 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ppp1r3gQ9CW07 347 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Snrnp35Q9D384 244 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Efhd1Q9D4J1 240 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Pkd2l2Q9JLG4 621 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Col5a2Q3U962 1497 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ccdc191J3QQ27 883 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 GpiP06745 558 aaKnown RBP15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 AaasP58742 546 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Frat1P70339 274 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Apba2P98084 750 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Spata18Q0P557 537 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Nt5c2Q3V1L4 560 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Map3k12Q60700 888 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ccna1Q61456 421 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 CbarpQ66L44 698 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Haus6Q6NV99 933 aaKnown RBP15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Mtss1lQ6P9S0 715 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Sass6Q80UK7 654 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Ercc6lQ8BHK9 1240 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 PaoxQ8C0L6 504 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Fam161bQ8CB59 589 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Riox2Q8CD15 465 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Plekhg6Q8R0J1 787 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Cabp7Q91ZM8 215 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Wdr64Q9D565 1086 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 RabggtaQ9JHK4 567 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 ArcQ9WV31 396 aa15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Fxr2Q9WVR4 673 aaKnown RBP15.03■□□□□ -0
Pdlim5-208ENSMUST00000196220 Kif23E9Q5G3 953 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Sox5P35710 763 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Olfr121Q5CZY0 321 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Pnma5Q5DTT8 618 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Adgrg6Q6F3F9 1165 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Krt87Q6IMF0 495 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Camsap3Q80VC9 1252 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Ildr1Q8CBR1 537 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Tab2Q99K90 693 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Rbm10Q99KG3 930 aaKnown RBP15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Gnl2Q99LH1 728 aaKnown RBP15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Syce1Q9D495 329 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Mss51Q9D5Z5 446 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Klhl40Q9D783 621 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Pex3Q9QXY9 372 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 GsdmeQ9Z2D3 512 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Btaf1E9QAE3 1848 aa15.02□□□□□ -0.01
Pdlim5-208ENSMUST00000196220 Cyp2j7A0A140T8U1 504 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 165.5 ms