RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Frmpd4A2AFR3 1320 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Tpm3-rs7D3Z2H9 248 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 CnpP16330 420 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Cdkn1cP49919 348 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Pde5aQ8CG03 865 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Borcs6Q9D6W8 360 aa18.01■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gna11P21278 359 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Mybl2P48972 704 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gxylt1Q3UHH8 404 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Rasgrp4Q8BTM9 673 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Ccdc94Q9D6J3 314 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Sgpp1Q9JI99 430 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Ly6iQ9WU67 134 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Dnaaf4Q8R368 420 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Arpp21Q9DCB4 807 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Irx4Q9QY61 515 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Copb2O55029 905 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Sept2P42208 361 aaKnown RBP18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Qrich1Q3UA37 777 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gpatch11Q3UFS4 262 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Tnni3kQ5GIG6 834 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Madcam1Q61826 405 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Pspc1Q8R326 523 aaKnown RBP18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Tmem79Q9D709 391 aa18■□□□□ 0.47
Trim39-203ENSMUST00000113706 Mtfr1lQ9CWE0 289 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Galntl5Q9D4M9 431 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Dnai2A2AC93 623 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Slc39a2G3X943 309 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Sdc2P43407 202 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Nxf2Q4ZGD8 691 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gm2163Q6PCY5 473 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 E2f4Q8R0K9 410 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Styxl1Q9DAR2 321 aa17.99■□□□□ 0.47
Trim39-203ENSMUST00000113706 Ncf1Q09014 390 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Cep128Q8BI22 1102 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Mmtag2Q99LX5 260 aaKnown RBP17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 BccipQ9CWI3 316 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gm5624F6ZZG8 207 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Hs2st1Q8R3H7 356 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 SmapQ9R0P4 181 aaKnown RBP17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Mtmr9Q9Z2D0 545 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Dnajc25A2ALW5 357 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Sun3Q5SS91 320 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 TfrcQ62351 763 aaKnown RBP17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Taf1dQ9D4V4 322 aa17.98■□□□□ 0.47
Trim39-203ENSMUST00000113706 Mx1P09922 631 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Oxr1Q4KMM3 866 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gtf3c5Q8R2T8 520 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Apbb1ipQ8R5A3 670 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Washc1Q8VDD8 475 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Ppp2r5dQ91V89 594 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gm7356A0A087WSA6 508 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Ap5z1Q3U829 807 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Znrd1-asQ8R0E5 213 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Baiap2l1Q9DBJ3 514 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Nlrp5Q9R1M5 1163 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 CluhQ5SW19 1315 aa17.97■□□□□ 0.47
Trim39-203ENSMUST00000113706 Akap4Q60662 849 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 IbspQ61711 324 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 PrimpolQ6P1E7 537 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gpcpd1Q8C0L9 675 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Scfd1Q8BRF7 639 aaKnown RBP17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Gm45140A0A0N4SUM8 220 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Cnga2Q62398 664 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Caps2Q8BUG5 550 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Kctd10Q922M3 315 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Tmem191cQ9JJB1 302 aa17.96■□□□□ 0.47
Trim39-203ENSMUST00000113706 Asnsd1Q8BFS9 627 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Serpina16D3Z660 418 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Rsph10bE9PYQ0 876 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Cdc37Q61081 379 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 PigsQ6PD26 555 aaKnown RBP17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Armc6Q8BNU0 468 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Tor1aip2Q8BYU6 502 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Hdac9Q99N13 588 aa17.95■□□□□ 0.46
Trim39-203ENSMUST00000113706 Palm3A2TJV2 734 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Znf568E9PYI1 671 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Kcnd1Q03719 651 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Arhgef6Q8K4I3 771 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 OscarQ8VBT3 265 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 AdpgkQ8VDL4 496 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Pla2g4bP0C871 782 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Trim30aP15533 496 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Krt39Q6IFX4 482 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 GypcQ78HU7 95 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 BC048507Q80ZS7 89 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Zdhhc14Q8BQQ1 489 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ptrh1Q8BW00 204 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Brms1Q99N20 246 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Eid1Q9DCR4 169 aa17.94■□□□□ 0.46
Trim39-203ENSMUST00000113706 Nme9A0A1L1SUL6 329 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 PsdQ5DTT2 1024 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Riox2Q8CD15 465 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ugt1a6bK9J7B2 531 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Nek1P51954 1203 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Psg29Q3URN6 468 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ugt1a6Q64435 531 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Gpbp1Q6NXH3 473 aaKnown RBP17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ugt1a7cQ6ZQM8 531 aa17.93■□□□□ 0.46
Trim39-203ENSMUST00000113706 Ms4a5Q810P8 197 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms