RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gpaa1Q9WTK3 621 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 NesQ6P5H2 1864 aaKnown RBP12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Myh7bA2AQP0 1941 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Izumo3A6PWV3 263 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gm7347D3YYI9 267 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Speer4aF8VPX6 267 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Lrrc4bP0C192 709 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Gfpt1P47856 697 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Plekha7Q3UIL6 1118 aaKnown RBP12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 HrQ61645 1182 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Pde1cQ64338 706 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Sar1bQ9CQC9 198 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Homer1Q9Z2Y3 366 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ddx23D3Z0M9 819 aaKnown RBP12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 ByslO54825 436 aaKnown RBP12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Snai1Q02085 264 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Hdac4Q6NZM9 1076 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ppp2r3dQ9Z176 491 aa12.97□□□□□ -0.33
Col9a1-202ENSMUST00000088349 ErmardE9Q048 622 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Slc39a2G3X943 309 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Pla2g4aP47713 748 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 DSCC1Q14AI0 399 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Arhgef2Q60875 985 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Ctr9Q62018 1173 aaKnown RBP12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 GypcQ78HU7 95 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Lrrc15Q80X72 579 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Atp1a1Q8VDN2 1023 aaKnown RBP12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Sh3bp5lQ99LH9 392 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Scrn1Q9CZC8 414 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 EhhadhQ9DBM2 718 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Arpp21Q9DCB4 807 aa12.96□□□□□ -0.33
Col9a1-202ENSMUST00000088349 Kifc2O08672 792 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Zfpm1O35615 995 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sema6bO54951 886 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sycp1Q62209 993 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pabpc4Q6PHQ9 660 aaKnown RBP12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pramel6Q810Y9 485 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Bpifb6Q8BU51 449 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tmem63cQ8CBX0 802 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tmem60Q8K174 133 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Arhgef6Q8K4I3 771 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gimap7Q8R379 293 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Exoc1Q8R3S6 894 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ginm1Q91WR6 327 aa12.96□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gm5934D3Z4U6 212 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tuft1O08970 390 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pafah1b1P63005 410 aaKnown RBP12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gja3Q64448 417 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tekt3Q6X6Z7 490 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Cep95Q8BVV7 827 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 MlphQ91V27 590 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Eif4enif1Q9EST3 983 aaKnown RBP12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Dpf1Q9QX66 387 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pex3Q9QXY9 372 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Nfil3O08750 462 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Stag2O35638 1231 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 ItgadQ3V0T4 1168 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tsr1Q5SWD9 803 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 RadxQ8C779 850 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Leng8Q8CBY3 785 aaKnown RBP12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Apopt1Q9CQW7 192 aa12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Knop1Q9Z2Q2 478 aaKnown RBP12.95□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Eif6O55135 245 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gpbp1Q6NXH3 473 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc122Q8BVN0 290 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fermt2Q8CIB5 680 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Sde2Q8K1J5 448 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ccdc83Q9D4V3 305 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 CenphQ9QYM8 241 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Myh7Q91Z83 1935 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Bcl9lQ67FY2 1494 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Gm10378F6XQQ1 160 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fkbp1aP26883 108 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Dnm2P39054 870 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Rps8P62242 208 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Kifap3P70188 793 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ppp1r7Q3UM45 361 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ankrd13cQ3UX43 541 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Eps8l1Q8R5F8 716 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Dnajc17Q91WT4 303 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Grin3bQ91ZU9 1003 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Cxcl11Q9JHH5 100 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 RabggtaQ9JHK4 567 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 EvplQ9D952 2035 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Krt78E9Q0F0 1068 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Prl2c3P04768 224 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Parp1P11103 1013 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Stim1P70302 685 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Slc9a1Q61165 820 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ezh2Q61188 746 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Asic3Q6X1Y6 530 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tubb2aQ7TMM9 445 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Slc20a2Q80UP8 656 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Rnf187Q8BFX1 236 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Pm20d1Q8C165 503 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Adcy3Q8VHH7 1145 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Tubb2bQ9CWF2 445 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Ipo7Q9EPL8 1038 aaKnown RBP12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Fut8Q9WTS2 575 aa12.94□□□□□ -0.34
Col9a1-202ENSMUST00000088349 Kank3Q9Z1P7 791 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms