RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Pfkfb1P70266 471 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Irak1Q62406 710 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Tekt3Q6X6Z7 490 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 D130040H23RikQ8BII3 405 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sfr1Q8BP27 319 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ttc19Q8CC21 365 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 NptxrQ99J85 493 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Mrpl44Q9CY73 333 aaKnown RBP12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cwc25Q9DBF7 416 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Egfl6Q9JJZ5 550 aa12.74□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Slfn8B1ARD8 910 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Gm5624F6ZZG8 207 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Phactr1Q2M3X8 580 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Smg7Q5RJH6 1138 aaKnown RBP12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 BcanQ61361 883 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cadps2Q8BYR5 1297 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Mta1Q8K4B0 715 aaKnown RBP12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 PapolbQ9WVP6 641 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 AceP09470 1312 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cep126Q0VBV7 1103 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Daam2Q80U19 1115 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sox30Q8CGW4 782 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 PygbQ8CI94 843 aaKnown RBP12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 CrebzfQ91ZR3 358 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sar1bQ9CQC9 198 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 UvssaQ9D479 717 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Atp6v1g2Q9WTT4 118 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Agbl1Q09M05 972 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 GmncQ3URY2 333 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ccdc82Q6PG04 518 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Hook2Q7TMK6 716 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Gpr139Q80UC8 345 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ppp1r10Q80W00 888 aaKnown RBP12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Asnsd1Q8BFS9 627 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ints5Q8CHT3 1018 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ero1aQ8R180 464 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Terf2ipQ91VL8 393 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cacna2d3Q9Z1L5 1091 aa12.73□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Mst1rQ62190 1378 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 BcorQ8CGN4 1759 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cyp26c1B2RXA7 518 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Fam47eD3YWC7 402 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Hcls1P49710 486 aaKnown RBP12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Timm10P62073 90 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Gm1604bQ3TRG0 118 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Igflr1Q3U4N7 345 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Washc4Q3UMB9 1173 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Kif5bQ61768 963 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Micall1Q8BGT6 870 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 N4bp3Q8C7U1 537 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Champ1Q8K327 802 aaKnown RBP12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Rnf138rt1Q9D9M9 248 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 IncenpQ9WU62 880 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Cdc27A2A6Q5 825 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sec24cG3X972 1096 aaKnown RBP12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Birc5O70201 140 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sult6b1P0CC03 303 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Pdha1P35486 390 aaKnown RBP12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Stim2P83093 746 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ccdc127Q3TC33 260 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ccdc110Q3V125 848 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Trim52Q8CDV4 233 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Haus2Q9CQS9 234 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Vnn1Q9Z0K8 512 aa12.72□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Prl3d3A0A0M6L0J6 224 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Tada2bD3Z4Z0 420 aaKnown RBP12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Tmod1P49813 359 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Opa1P58281 960 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Sptlc2P97363 560 aaKnown RBP12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Smarcad1Q04692 1021 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Pacs2Q3V3Q7 862 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ccnl1Q52KE7 532 aaKnown RBP12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ubxn10Q8BG34 277 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Nop9Q8BMC4 636 aaKnown RBP12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Golim4Q8BXA1 655 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 SnrkQ8VDU5 748 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ccdc182Q9D9C6 152 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Peg12Q9WVA7 283 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Nr1d1Q3UV55 615 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Ltv1Q6NSQ7 470 aaKnown RBP12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Alg1Q921Q3 482 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Naa16Q9DBB4 864 aa12.71□□□□□ -0.37
Ssh1-201ENSMUST00000077689 Slit1Q80TR4 1531 aa12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Man2a2Q8BRK9 1152 aa12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ccser1Q8C0C4 895 aa12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Srfbp1Q9CZ91 441 aaKnown RBP12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Mrps25Q9D125 171 aaKnown RBP12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 1700109H08RikQ9D9C0 210 aa12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Sept3Q9Z1S5 350 aa12.71□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pus7B7ZNL8 666 aaKnown RBP12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Lrrc4bP0C192 709 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pla2g4bP0C871 782 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Pla2g4eQ50L42 875 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ksr1Q61097 873 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Mea1Q64327 174 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Smim5Q8BT42 78 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Ccdc92Q8VDN4 314 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Kcnh3Q9WVJ0 1095 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Znf536Q8K083 1302 aa12.7□□□□□ -0.38
Ssh1-201ENSMUST00000077689 Irgm2A0A140LIF8 407 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 106 ms