RNA–Protein interactions for RNA: ENSMUST00000071544.10

Snapc3-202, Transcript of snRNA-activating protein complex subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Snapc3, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc3-202ENSMUST00000071544 Entpd7Q3TCT4 606 aa20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Usp6nlQ80XC3 819 aa20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Usp38Q8BW70 1042 aa20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Vps53Q8CCB4 832 aa20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Tmx2Q9D710 295 aaKnown RBP20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Twf2Q9Z0P5 349 aaKnown RBP20.63■□□□□ 0.89
Snapc3-202ENSMUST00000071544 TicrrQ8BQ33 1889 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Traf1P39428 409 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Slc9a7Q8BLV3 726 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Stard7Q8R1R3 373 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 DaglbQ91WC9 669 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Smarca5Q91ZW3 1051 aaKnown RBP20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Rwdd1Q9CQK7 243 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Cep290Q6A078 2472 aa20.62■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Aldh1a1P24549 501 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Col9a1Q05722 921 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Phlda1Q62392 405 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Atad2Q8CDM1 1040 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 OplahQ8K010 1288 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Mtmr4Q91XS1 1190 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 CutaQ9CQ89 177 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 4921524L21RikQ9D5T2 438 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Appbp2Q9DAX9 585 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Znf287Q9EQB9 759 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Msgn1Q9JK54 188 aa20.61■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Ece1Q4PZA2 769 aa20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Phf24Q80TL4 400 aa20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Fbxl21Q8BFZ4 434 aa20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Onecut3Q8K557 490 aa20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Spred2Q924S7 410 aa20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Akap8Q9DBR0 687 aaKnown RBP20.6■□□□□ 0.89
Snapc3-202ENSMUST00000071544 TroapB7ZNG4 668 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 EomesO54839 707 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Dnajb6O54946 365 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Glud1P26443 558 aaKnown RBP20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Znf800Q0VEE6 662 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Tp53i13Q5F267 385 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Tex2Q6ZPJ0 1128 aaKnown RBP20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Zdhhc15Q8BGJ0 337 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Ttll1Q91V51 423 aa20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Obsl1D3YYU8 1804 aaKnown RBP20.59■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Gm7173A0A0G2JEB6 3132 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 BC025446A0A087WQT1 134 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 A430078G23RikE9Q7Y4 484 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Usp53P15975 1069 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Cyp2d10P24456 504 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Ddit3P35639 168 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Gnat2P50149 354 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Srebf2Q3U1N2 1130 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Atp13a3Q5XF89 1219 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Cachd1Q6PDJ1 1288 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Ms4a5Q810P8 197 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Gga3Q8BMI3 718 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 PdhbQ9D051 359 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Dusp6Q9DBB1 381 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Tbx20Q9ES03 445 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 PalmdQ9JHU2 551 aa20.58■□□□□ 0.89
Snapc3-202ENSMUST00000071544 Stxbp3Q60770 592 aa20.57■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Tacc1Q6Y685 774 aa20.57■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Nup133Q8R0G9 1155 aa20.57■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Dennd3A2RT67 1274 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Pbx2O35984 430 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Prom1O54990 867 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Adgrg6Q6F3F9 1165 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 ScapQ6GQT6 1276 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Olfr118Q7TRJ6 321 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Trim56Q80VI1 734 aaKnown RBP20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Tdp1Q8BJ37 609 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Vmn1r191Q8K4D0 298 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 DutQ8VCG1 200 aaKnown RBP20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Atp5c1Q91VR2 298 aaKnown RBP20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Atg13Q91YI1 516 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Efcc1Q9JJF6 558 aa20.56■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Lamb2Q61292 1799 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Dnajc25A2ALW5 357 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Gm20503G3UZK1 150 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 LdhbP16125 334 aaKnown RBP20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Samhd1Q60710 627 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Rhobtb2Q91V93 728 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 GldcQ91W43 1025 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Rab30Q923S9 203 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Pus10Q9D3U0 527 aa20.55■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Capn2O08529 700 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Pla2g6P97819 807 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Pou2f2Q00196 463 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Gm1587Q3UT80 123 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Otop3Q80UF9 577 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 1700001K19RikQ80ZT1 219 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Ttc12Q8BW49 704 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Lmbrd2Q8C561 694 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Arhgef6Q8K4I3 771 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 GneQ91WG8 722 aaKnown RBP20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 PolkQ9QUG2 852 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Sall2Q9QX96 1004 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Hic1Q9R1Y5 733 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Sept3Q9Z1S5 350 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Myh7Q91Z83 1935 aa20.54■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Slc6a21A0A1B0GSD2 748 aa20.53■□□□□ 0.88
Snapc3-202ENSMUST00000071544 G430095P16RikE9Q913 147 aa20.53■□□□□ 0.88
Snapc3-202ENSMUST00000071544 Phka1P18826 1241 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms