RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Lig1P37913 916 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Krt27Q9Z320 448 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Myh3P13541 1940 aa17.12■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Zyg11aA2BFL2 627 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mmp8O70138 465 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Atp8a1P70704 1164 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm5169Q5M8P2 212 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Lyve1Q8BHC0 318 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Caps2Q8BUG5 550 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Tsta3P23591 321 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gbp10Q000W5 611 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nom1Q3UFM5 854 aaKnown RBP17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 DbnlQ62418 436 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Utp11Q9CZJ1 253 aaKnown RBP17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 LdhaP06151 332 aaKnown RBP17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nrbf2Q8VCQ3 287 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Angptl3Q9R182 455 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Lzts3A2AHG0 700 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ddit3P35639 168 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pfdn4Q3UWL8 134 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ppp2r5eQ61151 467 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Zkscan8Q8BSL0 588 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pfdn1Q9CWM4 122 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 AW822073A0A0N4SUK1 652 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Nr1d1Q3UV55 615 aa17.11■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pde6aP27664 859 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Trim66Q924W6 1242 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Bpifb4A2BGH0 617 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 SpertQ32MG2 446 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ankrd13dQ6PD24 605 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gbp4A4UUI3 631 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cnbd1B1AWM0 430 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Slc3a2P10852 526 aaKnown RBP17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ctnnd1P30999 938 aaKnown RBP17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cyth2P63034 400 aaKnown RBP17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Stkld1Q80YS9 662 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Dr1Q91WV0 176 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gstt4Q9D4P7 240 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Dmrtc1Q9D9R7 182 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Parp2O88554 559 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Hspa1lP16627 641 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 HpdP49429 393 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Krt9Q6RHW0 743 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Edc3Q8K2D3 508 aaKnown RBP17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Trim60Q8VI40 466 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 DohhA0A1Y7VJ29 135 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Sec24cG3X972 1096 aaKnown RBP17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Card10P58660 1021 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cnot10Q8BH15 744 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Klhl40Q9D783 621 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 InhbaQ04998 424 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 OtulinQ3UCV8 352 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cog4Q8R1U1 785 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm28961A0A087WPA5 222 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm21858A0A087WQ24 222 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Speer4eK7N6S8 255 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Aifm3Q3TY86 605 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 PsdQ5DTT2 1024 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 MgarpQ8VI64 283 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pcdhb5Q91XZ5 792 aa17.1■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gm1661E9Q963 441 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mei4Q8BRM6 389 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Stk11Q9WTK7 436 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cpb1B2RS76 415 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 ThrspQ62264 150 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 SrlQ7TQ48 910 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Armc3A2AU72 881 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Ets1P27577 440 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Tmem60Q8K174 133 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rtn3Q9ES97 964 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 MybP06876 636 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Arhgap30Q640N3 1101 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Hdac4Q6NZM9 1076 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 SympkQ80X82 1284 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Gprasp2Q8BUY8 826 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Snapc4Q8BP86 1333 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Kcnk9Q3LS21 402 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Cdc23Q8BGZ4 597 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Fgd4Q91ZT5 766 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Polr2fP61219 127 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Pcdha12Q91Y18 950 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Catsper1Q91ZR5 686 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 CutaQ9CQ89 177 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Rmi1Q9D4G9 616 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Naip5Q9R016 1403 aa17.09■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Hspa8P63017 646 aaKnown RBP17.08■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Prc1Q99K43 603 aaKnown RBP17.08■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Mrps22Q9CXW2 359 aa17.08■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Sgk1Q9WVC6 431 aa17.08■□□□□ 0.33
Ubr3-201ENSMUST00000055758 Myef2Q8C854 591 aaKnown RBP17.08■□□□□ 0.33
Ubr3-201ENSMUST00000055758 ItkQ03526 625 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trim42Q9D2H5 723 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ccdc103Q9D9P2 237 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cyp2ab1S4R196 498 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Apol11aE9PZG0 334 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Eif4a2P10630 407 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Pdha1P35486 390 aaKnown RBP17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Stx3Q64704 289 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Farp2Q91VS8 1065 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Bnip3lQ9Z2F7 218 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms