RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 AdarQ99MU3 1178 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Syf2Q9D198 242 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 EhhadhQ9DBM2 718 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gja10Q9WUS4 505 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Myh13B1AR69 1938 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Serpina16D3Z660 418 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Foxn2E9Q7L6 429 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 ByslO54825 436 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ftl1P29391 183 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Usp5P56399 858 aaKnown RBP10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Eva1cP58659 440 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cct6bQ61390 531 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ccdc122Q8BVN0 290 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cep95Q8BVV7 827 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Apopt1Q9CQW7 192 aa10.99□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gm5934D3Z4U6 212 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Prl2c3P04768 224 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Rhbdl3P58873 404 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Arhgef2Q60875 985 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Irak1Q62406 710 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Aggf1Q7TN31 711 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Bsdc1Q80Y55 427 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 DlatQ8BMF4 642 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Zdhhc14Q8BQQ1 489 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Matr3Q8K310 846 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Mss51Q9D5Z5 446 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Emc10Q3TAS6 258 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Fhod1Q6P9Q4 1197 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Pabpc4Q6PHQ9 660 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Arhgef6Q8K4I3 771 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Atp1a1Q8VDN2 1023 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Klc3Q91W40 508 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ttc14Q9CSP9 761 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Dbndd1Q9CZ00 160 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Homer1Q9Z2Y3 366 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Parp1P11103 1013 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Trap1aP19473 224 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Dnm2P39054 870 aaKnown RBP10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Sar1bQ9CQC9 198 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 1700018B08RikQ9DA83 213 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Snapc4Q8BP86 1333 aa10.98□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 DccP70211 1447 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gfpt1P47856 697 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Grin3bQ91ZU9 1003 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 RarsQ9D0I9 660 aaKnown RBP10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Nr2e3Q9QXZ7 395 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 ErmardE9Q048 622 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gm10378F6XQQ1 160 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ell2Q3UKU1 639 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 ItgadQ3V0T4 1168 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Myo19Q5SV80 963 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tsr1Q5SWD9 803 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Sel1lQ9Z2G6 790 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 PappaQ8R4K8 1624 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Adgra3Q7TT36 1310 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ecm29Q6PDI5 1840 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Dnajc21E9Q8D0 531 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Gm42641I6L9G2 585 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Stim1P70302 685 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Trappc10Q3TLI0 1259 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Skap2Q3UND0 358 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tmtc2Q56A06 836 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Asic1Q6NXK8 526 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 AtripQ8BMG1 785 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Leng8Q8CBY3 785 aaKnown RBP10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Myl6bQ8CI43 207 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tmem134Q8R0J4 195 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ndufv1Q91YT0 464 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cd2apQ9JLQ0 637 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Myo1cQ9WTI7 1063 aa10.97□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Aox3G3X982 1335 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 RaraP11416 462 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Kcna1P16388 495 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Rnf40Q3U319 1001 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 HrQ61645 1182 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Jade2Q6ZQF7 829 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Ccdc38Q8CDN8 563 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Cwc15Q9JHS9 229 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Prl2c5Q9JLV9 222 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tmem132bF7BAB2 1078 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Islr2Q5RKR3 745 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Antxr2Q6DFX2 487 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Lrrn2Q6PHP6 730 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tubb2aQ7TMM9 445 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Bpifb6Q8BU51 449 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Usp27Q8CEG8 438 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Mmtag2Q99LX5 260 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Tubb2bQ9CWF2 445 aa10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Knop1Q9Z2Q2 478 aaKnown RBP10.96□□□□□ -0.65
Ccdc40-202ENSMUST00000053440 Scn4aQ9ER60 1841 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Zfp853A0A1D5RM95 733 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Ube3aO08759 870 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pla2g4aP47713 748 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Pafah1b1P63005 410 aaKnown RBP10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Snai1Q02085 264 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Armc2Q3URY6 854 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Mtss1lQ6P9S0 715 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Kdm1aQ6ZQ88 853 aa10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 Trub2Q91WG3 331 aaKnown RBP10.96□□□□□ -0.66
Ccdc40-202ENSMUST00000053440 MymkQ9D1N4 221 aa10.96□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms