RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 L3mbtl3Q8BLB7 883 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Taf4E9QAP7 1042 aaKnown RBP11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Krt14Q61781 484 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Tmem94Q7TSH8 1360 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Mroh9G5E8L9 891 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gdap1O88741 358 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Casp14O89094 257 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Traf5P70191 558 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Naa30Q8CES0 364 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Rbm19Q8R3C6 952 aaKnown RBP11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 LpxnQ99N69 386 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Telo2Q9DC40 840 aaKnown RBP11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Pdcd11Q6NS46 1862 aaKnown RBP11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Spocd1B1ASB6 936 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 MycnP03966 462 aaKnown RBP11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gtf3c6Q9D8P7 227 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 PigoQ9JJI6 1093 aa11.71□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Cdk4P30285 303 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Rasgrf2P70392 1189 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 AU022751B1B0V2 589 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Pdha1P35486 390 aaKnown RBP11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ankk1Q8BZ25 745 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Nup160Q9Z0W3 1402 aaKnown RBP11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Adgrl3Q80TS3 1537 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Scaf11E9PZM7 1456 aaKnown RBP11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Mmrn1B2RPV6 1210 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Chmp6P0C0A3 200 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 9230110C19RikQ8CC70 267 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Wars2Q9CYK1 360 aa11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Mrps9Q9D7N3 390 aaKnown RBP11.71□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Map3k19E9Q3S4 1311 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Stx2Q00262 289 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Lrrc43Q3V0L5 667 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ccdc92Q8VDN4 314 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 AatkQ80YE4 1365 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 HpdP49429 393 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Hps6Q8BLY7 805 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Gm43638A0A0J9YU36 694 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Gm1141B9EJU1 475 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Lrch1P62046 709 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Rnf10Q3UIW5 804 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ccnl1Q52KE7 532 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 MycbpapQ5SUV2 932 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Pip4k2cQ91XU3 421 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Trim16Q99PP9 556 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Akr1c19G3X9Y6 323 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Spag7Q7TNE3 227 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ripor2Q80U16 1078 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 ThemisQ8BGW0 636 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Hpcal4Q8BGZ1 191 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Sf3a3Q9D554 501 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Copb1Q9JIF7 953 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Dot1lQ6XZL8 1540 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Crnkl1P63154 690 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ccdc138Q0VF22 680 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Pabpc4Q6PHQ9 660 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Mrps25Q9D125 171 aaKnown RBP11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Arl2bpQ9D385 163 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Apba1B2RUJ5 842 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ccdc78D3Z5T1 437 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Traf1P39428 409 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tmtc2Q56A06 836 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tbc1d1Q60949 1255 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tbx22Q8K402 517 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Dnajc3Q91YW3 504 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Sytl1Q99N80 567 aa11.7□□□□□ -0.54
Nipbl-201ENSMUST00000052965 OtulinQ3UCV8 352 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt75Q8BGZ7 551 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 GlmnQ8BZM1 596 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Pih1h3bQ8C6P5 218 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Usp15Q8R5H1 981 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Dbn1Q9QXS6 706 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt36B1AQ75 473 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Adcy8P97490 1249 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt39Q6IFX4 482 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 HdlbpQ8VDJ3 1268 aaKnown RBP11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Acsl3Q9CZW4 720 aaKnown RBP11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Wdr46Q9Z0H1 622 aaKnown RBP11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Znf335A2A5K6 1337 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Bcap29Q61334 240 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tekt3Q6X6Z7 490 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 AsphQ8BSY0 741 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Tmod2Q9JKK7 351 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Snrpa1P57784 255 aaKnown RBP11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Ect2Q07139 913 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Spata4Q8K3V1 295 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Pcdha12Q91Y18 950 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cbx6Q9DBY5 414 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Usp19Q3UJD6 1360 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cul4bA2A432 970 aaKnown RBP11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Clcn6O35454 870 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt19P19001 403 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Cep85Q8BMK0 761 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Irak4Q8R4K2 459 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Nfe2l3Q9WTM4 660 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Zfp94E9Q6Y4 486 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Atp8a1P70704 1164 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Arhgap17Q3UIA2 846 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Gm11983V9GXS8 105 aa11.69□□□□□ -0.54
Nipbl-201ENSMUST00000052965 Krt13P08730 437 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms