RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 4933409G03RikQ8C5U0 320 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 HdlbpQ8VDJ3 1268 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Kctd10Q922M3 315 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cep83Q9D5R3 692 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Capn12Q9ER56 720 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gpaa1Q9WTK3 621 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Tspyl1O88852 379 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Eef2P58252 858 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Pcif1P59114 706 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 SbdsP70122 250 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Bach2P97303 839 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Bicd1Q8BR07 835 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Psmd2Q8VDM4 908 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rab3il1Q8VDV3 383 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 4930548H24RikQ9D496 437 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Vti1aO89116 217 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Celf1P28659 486 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Traf5P70191 558 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 CrkQ64010 304 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Churc1Q6DG52 112 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Krt40Q6IFX3 439 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Nucks1Q80XU3 234 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Morc4Q8BMD7 928 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Bicdl2Q8CHW5 507 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Armcx6Q8K3A6 301 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Sec63Q8VHE0 760 aaKnown RBP8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Asic2Q925H0 512 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cfap57Q9D180 1249 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Styxl1Q9DAR2 321 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Irx5Q9JKQ4 484 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gm32742A0A1B0GT42 1604 aa8.27□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rims2Q9EQZ7 1530 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Arhgef28P97433 1693 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 PtprmP28828 1452 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Apol11aE9PZG0 334 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Ankrd35E9Q9D8 996 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rab34Q64008 259 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Kiaa1328Q6NZK5 612 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cracr2bQ80ZJ8 394 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Ubxn1Q922Y1 297 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 StambpQ9CQ26 424 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Thap12Q9CUX1 758 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Pdzd4Q9QY39 772 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Aox2Q5SGK3 1345 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 DohhA0A1Y7VJ29 135 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rsbn1lD3Z0K6 821 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Nr1i2O54915 431 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Senp6Q6P7W0 1132 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Dpp9Q8BVG4 862 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 NelfbQ8C4Y3 580 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 YarsQ91WQ3 528 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Msantd4Q91YU3 345 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Zfyve19Q9DAZ9 389 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 FibpQ9JI19 357 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Twf2Q9Z0P5 349 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rbm6S4R1W5 1118 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 CltcQ68FD5 1675 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gimd1E9PW74 217 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Idh1O88844 414 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gbp8Q2V6D6 525 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Krt14Q61781 484 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Kiaa1841Q68FF0 718 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 SpopQ6ZWS8 374 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Me3Q8BMF3 604 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Irak4Q8R4K2 459 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Zcchc18Q8VD24 393 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Q8VDP2 222 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Mrpl11Q9CQF0 192 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Adcy9P51830 1353 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Setd1aE9PYH6 1716 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cdr1E9Q0B4 517 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gm1661E9Q963 441 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Tubb4bP68372 445 aaKnown RBP8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Tfdp1Q08639 410 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gm10392Q3V3I3 114 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Ppp1r1bQ60829 194 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Tas2r124Q7M718 309 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gramd4Q8CB44 633 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rbm41Q8JZV4 413 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 AacsQ9D2R0 672 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Mei1Q9D4I2 1268 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Rsph3bQ9DA80 389 aa8.26□□□□□ -1.09
Usp40-201ENSMUST00000040783 Tnnc1P19123 161 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Atp1a3Q6PIC6 1013 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Prpf40bQ80W14 870 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Cdk8Q8R3L8 464 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gbp6A0A0G2JDV3 611 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Mroh8E9PYI4 1049 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 AK157302I3ITR1 129 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Gm43302L7N1X8 611 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Dnajb6O54946 365 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Capza3P70190 299 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Top1Q04750 767 aaKnown RBP8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Zfp781Q0P5U5 243 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Specc1Q5SXY1 1067 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Jade3Q6IE82 823 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Mapk4Q6P5G0 583 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Spata24Q6P926 205 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 RbsnQ80Y56 783 aa8.25□□□□□ -1.09
Usp40-201ENSMUST00000040783 Sptlc3Q8BG54 563 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms