RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Ccdc122Q8BVN0 290 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Saal1Q9D2C2 474 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Akap8Q9DBR0 687 aaKnown RBP10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Tcof1O08784 1320 aaKnown RBP10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Pramel3A2AHA7 463 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Gm7903A2AWL1 463 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 AV320801A2AWL3 467 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 1700018F24RikB2RW27 314 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ankrd35E9Q9D8 996 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Gm15023L7MUB4 467 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ces1Q8VCC2 565 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ttc8Q8VD72 515 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ndufb9Q9CQJ8 179 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 EhhadhQ9DBM2 718 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Stk32bQ9JJX8 414 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Flt1P35969 1333 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ccdc191J3QQ27 883 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Cyp2d34L7N463 504 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Pafah1b1P63005 410 aaKnown RBP10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ssrp1Q08943 708 aaKnown RBP10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Rpusd2Q149F1 553 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Lrriq3Q14DL3 633 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Kiaa1211Q5PR69 1207 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Sp8Q8BMJ8 486 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Commd10Q8JZY2 202 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Trappc12Q8K2L8 797 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Ttll1Q91V51 423 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Nap1l5Q9JJF0 156 aa10.4□□□□□ -0.74
Rnf43-201ENSMUST00000040089 Slit2Q9R1B9 1521 aa10.4□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Akap11E9Q777 1895 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 AW822073A0A0N4SUK1 652 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 GabreA2AMW3 916 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Hoxa13Q62424 386 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Dhx40Q6PE54 779 aaKnown RBP10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Slc20a2Q80UP8 656 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Tmem39bQ810L4 492 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Riox2Q8CD15 465 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Plekhg6Q8R0J1 787 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 4921524L21RikQ9D5T2 438 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Tmem191cQ9JJB1 302 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Cabp5Q9JLK3 173 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Dpf1Q9QX66 387 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Tnip1Q9WUU8 647 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Col18a1P39061 1774 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 A0A1W2P6Q8 802 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gm9048A0A1W2P7H4 802 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 A0A1W2P7Z8 802 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gm9046A0A1W2P855 802 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Armc3A2AU72 881 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Pus7B7ZNL8 666 aaKnown RBP10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 PpardP35396 440 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Mex3cQ05A36 652 aaKnown RBP10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Q3TYL0 343 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 LrmpQ60664 539 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Rgl1Q60695 768 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 WaplQ65Z40 1200 aaKnown RBP10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Trex1Q91XB0 314 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ercc4Q9QZD4 917 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Exoc3l2D3YUP5 789 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 PcQ05920 1178 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ttbk2Q3UVR3 1243 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Zc3h6Q8BYK8 1177 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ccdc73Q8CDM4 1066 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Alg3Q8K2A8 438 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ccdc105Q9D4K7 499 aa10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 AdnpQ9Z103 1108 aaKnown RBP10.39□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gm43638A0A0J9YU36 694 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 EmbP21995 330 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Nf2P46662 596 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ncoa7Q6DFV7 943 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Zfp341Q6PGC9 846 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Brd2Q7JJ13 798 aaKnown RBP10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Efcab8Q8C9R9 203 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Phldb2Q8K1N2 1249 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 BbxQ8VBW5 907 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ubxn2aQ99KJ0 258 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Yeats4Q9CR11 227 aaKnown RBP10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Apol7aB2RT54 418 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Cfap70D3YVL2 1141 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Exosc10P56960 887 aaKnown RBP10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gpbp1Q6NXH3 473 aaKnown RBP10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gm2163Q6PCY5 473 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Lrrd1Q8C0R9 853 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Q8CEZ4 452 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gdap1l1Q8VE33 370 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ccdc78D3Z5T1 437 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Gucy1b3O54865 620 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 MyocO70624 490 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Kif5bQ61768 963 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Lztfl1Q9JHQ5 299 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Myo3bQ1EG27 1305 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ssc5dQ8BV57 1371 aa10.38□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Tbc1d9bQ5SVR0 1263 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Rhpn1Q61085 643 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 PigsQ6PD26 555 aaKnown RBP10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Rufy1Q8BIJ7 712 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Skor1Q8BX46 964 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Ptf1aQ9QX98 324 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Nr2e3Q9QXZ7 395 aa10.37□□□□□ -0.75
Rnf43-201ENSMUST00000040089 Phldb3E9QAF4 648 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms