RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 RaraP11416 462 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 HdgfP51859 237 aaKnown RBP15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Slc12a2P55012 1205 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Rbm15bQ6PHZ5 887 aaKnown RBP15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Ccp110Q7TSH4 1004 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Lrsam1Q80ZI6 727 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Smim5Q8BT42 78 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Slx1bQ8BX32 270 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Stap2Q8R0L1 411 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Kank3Q9Z1P7 791 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Col18a1P39061 1774 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Ppfia4B8QI36 1187 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Cyp2c23E9Q5K4 494 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Prl2c3P04768 224 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Ifnar1P33896 590 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Gngt1Q61012 74 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Epha10Q8BYG9 1007 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Atp1a1Q8VDN2 1023 aaKnown RBP15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Grin3bQ91ZU9 1003 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Coro7Q9D2V7 922 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 CpvlQ9D3S9 478 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Cxcl11Q9JHH5 100 aa15.04■□□□□ -0
Nup88-201ENSMUST00000035283 Trim30cD3YVI9 513 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Gm10378F6XQQ1 160 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Ap1g2O88512 791 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Usp53P15975 1069 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 PcQ05920 1178 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Traf3ip1Q149C2 625 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Zmym1Q3TJB1 983 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Gja3Q64448 417 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Slf2Q6P9P0 1278 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 BcrQ6PAJ1 1270 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 CutaQ9CQ89 177 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 MymkQ9D1N4 221 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Rapgef4Q9EQZ6 1011 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Prl2c5Q9JLV9 222 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Nfu1Q9QZ23 255 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Ankrd31A0A140LI88 1765 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Cdhr2E9Q7P9 1308 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Gm36210A0A1B0GS00 229 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Pfkfb3A7UAK5 555 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Krt78E9Q0F0 1068 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 PurbO35295 324 aaKnown RBP15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Mapkapk5O54992 473 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Kdm7aQ3UWM4 940 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Slc9a1Q61165 820 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Krt40Q6IFX3 439 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Gimap7Q8R379 293 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Eps8l2Q99K30 729 aa15.03■□□□□ -0
Nup88-201ENSMUST00000035283 Myh3P13541 1940 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Zfp853A0A1D5RM95 733 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Herc3A6H6S0 1050 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 1700029H14RikE9PY36 240 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Slc39a2G3X943 309 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Calm1P0DP26 149 aaKnown RBP15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Calm2P0DP27 149 aaKnown RBP15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Calm3P0DP28 149 aaKnown RBP15.02■□□□□ -0
Nup88-201ENSMUST00000035283 SarsP26638 512 aaKnown RBP15.02■□□□□ -0
Nup88-201ENSMUST00000035283 NeblQ0II04 452 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Ehmt1Q5DW34 1296 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Acbd5Q5XG73 508 aa15.02■□□□□ -0
Nup88-201ENSMUST00000035283 Etnk2A7MCT6 385 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 ErmardE9Q048 622 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 C2cd2E9Q3C1 696 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ppef2O35385 757 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Stag2O35638 1231 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Pafah1b1P63005 410 aaKnown RBP15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Stim2P83093 746 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trappc10Q3TLI0 1259 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Tmem35bQ3U0Y2 150 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Madcam1Q61826 405 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ces3aQ63880 571 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 PnocQ64387 187 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 D130040H23RikQ8BII3 405 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ccdc122Q8BVN0 290 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nup133Q8R0G9 1155 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Exoc1Q8R3S6 894 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ces3bQ8VCU1 571 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Mmtag2Q99LX5 260 aaKnown RBP15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Trim34aQ99PP6 485 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Nol7Q9D7Z3 254 aaKnown RBP15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 AvenQ9D9K3 342 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Pex3Q9QXY9 372 aa15.02□□□□□ -0.01
Nup88-201ENSMUST00000035283 Zfpm1O35615 995 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Slc7a3P70423 618 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ano9P86044 747 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 SfswapQ3USH5 945 aaKnown RBP15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Krit1Q6S5J6 736 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Kctd3Q8BFX3 815 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Znf771Q8BJ90 317 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Rasgrp4Q8BTM9 673 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 HdlbpQ8VDJ3 1268 aaKnown RBP15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Osbpl1aQ91XL9 950 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Peg12Q9WVA7 283 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 NesQ6P5H2 1864 aaKnown RBP15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 JcadQ5DTX6 1320 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Otud7bB2RUR8 840 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Akr1c19G3X9Y6 323 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Sco1Q5SUC9 284 aa15.01□□□□□ -0.01
Nup88-201ENSMUST00000035283 Ccdc42Q5SV66 316 aa15.01□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms