RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Cnnm1Q0GA42 951 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Prl2c1Q5SVL9 228 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ift88Q61371 824 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Klhl23Q6GQU2 558 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Nop56Q9D6Z1 580 aaKnown RBP12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Abca3Q8R420 1704 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Trmt1Q3TX08 663 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Dnajc8Q6NZB0 253 aaKnown RBP12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Haus7Q8BKT8 364 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ccdc65Q8VHI7 493 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Pcdha7Q91Y13 937 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tmem39aQ9CYC3 486 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 TefQ9JLC6 301 aa12.94□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ubr2Q6WKZ8 1755 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Slfn8B1ARD8 910 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Vmn2r23E9PXI5 849 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Eftud2O08810 971 aaKnown RBP12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ctnnd1P30999 938 aaKnown RBP12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tmprss11aQ3UQ41 389 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Nr1d1Q3UV55 615 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Vps37dQ810I0 261 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Anks1bQ8BIZ1 1259 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Znf536Q8K083 1302 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Gm20425E9Q035 978 aaKnown RBP12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Klc1O88447 541 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Bcl2l13P59017 434 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Pde4dQ01063 747 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 VeztQ3ZK22 780 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Map3k2Q61083 619 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ift122Q6NWV3 1182 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Rint1Q8BZ36 792 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tango6Q8C3S2 1079 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Mmgt1Q8K273 131 aaKnown RBP12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 P3h4Q8K2B0 443 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Caap1Q8VDY9 356 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Plcb4Q91UZ1 1175 aa12.93□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Odf2A3KGV1 830 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Eif4a1P60843 406 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ezh1P70351 747 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Hdgfl1Q2VPR5 283 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 DbnlQ62418 436 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Mea1Q64327 174 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ehbp1Q69ZW3 1231 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Gbp9Q8BTS3 619 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Sugp1Q8CH02 643 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Nsmce1Q9D720 266 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ftsj3Q9DBE9 838 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Angptl3Q9R182 455 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tex13c2A0A0G2JGA3 530 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Clcn6O35454 870 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Opa1P58281 960 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 TraddQ3U0V2 310 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Fam198bQ3UPI1 517 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Orc2Q60862 576 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 MtrrQ8C1A3 696 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Rbm41Q8JZV4 413 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Rab27aQ9ERI2 221 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Pus3Q9JI38 481 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Gm13023A2A8N2 498 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Akr1b10G5E895 316 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Birc5O70201 140 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Chp1P61022 195 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 PapolaQ61183 739 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Secisbp2lQ6A098 1086 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tmem59lQ7TNI2 337 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Acnat2Q8BGG9 420 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Nup133Q8R0G9 1155 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Taf6lQ8R2K4 616 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 NptxrQ99J85 493 aa12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Vwa5aQ99KC8 793 aaKnown RBP12.92□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Fkbp4P30416 458 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ppp4r3aQ6P2K6 820 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 CntrobQ8CB62 887 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ccdc150Q8CDI7 1110 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Lin7aQ8JZS0 233 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Eva1bQ8K2Y3 164 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Matr3Q8K310 846 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Dtnbp1Q91WZ8 352 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 1700109H08RikQ9D9C0 210 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Kif23E9Q5G3 953 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Gm29094F6Q785 221 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Epb41l2O70318 988 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Tpp1O89023 562 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Iqsec3Q3TES0 1195 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Pabpc4Q6PHQ9 660 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Dhx38Q80X98 1228 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Erich5Q8K0S2 362 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 HibchQ8QZS1 385 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Mical1Q8VDP3 1048 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Ddx47Q9CWX9 455 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 MthfsQ9D110 203 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Mrps25Q9D125 171 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Mphosph6Q9D1Q1 161 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Trp53inp1Q9QXE4 239 aa12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Uso1Q9Z1Z0 959 aaKnown RBP12.91□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Grm8P47743 908 aa12.9□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Hmgb1P63158 215 aaKnown RBP12.9□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Zic5Q7TQ40 622 aa12.9□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Pank4Q80YV4 820 aa12.9□□□□□ -0.34
Vamp1-201ENSMUST00000032487 Champ1Q8K327 802 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms