RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Haus2Q9CQS9 234 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Col14a1Q80X19 1797 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Atp6v0a2P15920 856 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 PsdQ5DTT2 1024 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ncapg2Q6DFV1 1138 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Col16a1Q8BLX7 1580 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Proca1B0QZF7 307 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Nf2P46662 596 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Spata5Q3UMC0 893 aaKnown RBP12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cep63Q3UPP8 700 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ccdc148Q6P5U8 527 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Kdm1aQ6ZQ88 853 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 BC048507Q80ZS7 89 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Slc44a4Q91VA1 707 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Fbxo3Q9DC63 480 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Irx1P81068 480 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 1810065E05RikQ5NC41 235 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Scaf8Q6DID3 1268 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Calcoco1Q8CGU1 691 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Spire2Q8K1S6 718 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Osbpl1aQ91XL9 950 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 CsadQ9DBE0 493 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Nr2e3Q9QXZ7 395 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Rad23aP54726 363 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 PcQ05920 1178 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Eepd1Q3TGW2 569 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Aak1Q3UHJ0 959 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 ErmnQ5EBJ4 281 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Exoc3Q6KAR6 755 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cep128Q8BI22 1102 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Als2cr12Q8BVM7 383 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Alg3Q8K2A8 438 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 CpzQ8R4V4 654 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 HdlbpQ8VDJ3 1268 aaKnown RBP12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cabp7Q91ZM8 215 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 Gm11983V9GXS8 105 aa12.09□□□□□ -0.47
Msh3-201ENSMUST00000022220 DohhA0A1Y7VJ29 135 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Stag2O35638 1231 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Enc1O35709 589 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Abcb4P21440 1276 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cyp4x1Q6A152 507 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Herc4Q6PAV2 1057 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ppp2r5bQ6PD28 497 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Trim6Q8BGE7 488 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 SowahdQ8BY98 327 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 PaoxQ8C0L6 504 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Alx1Q8C8B0 326 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Arhgef6Q8K4I3 771 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Sf3b3Q921M3 1217 aaKnown RBP12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Card14Q99KF0 999 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Lman1Q9D0F3 517 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Hs6st3Q9QYK4 470 aa12.08□□□□□ -0.47
Msh3-201ENSMUST00000022220 Kif20bQ80WE4 1774 aaKnown RBP12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 A0A1W2P6Q8 802 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm9048A0A1W2P7H4 802 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 A0A1W2P7Z8 802 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm9046A0A1W2P855 802 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Kifap3P70188 793 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cdr2P97817 455 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tfcp2l1Q3UNW5 479 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tas2r124Q7M718 309 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rassf10Q8BL43 508 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ces1Q8VCC2 565 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ndufab1Q9CR21 156 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Mis12Q9CY25 206 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tacc2Q9JJG0 1149 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Egfl6Q9JJZ5 550 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Nrxn3Q6P9K9 1571 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Grin2dQ03391 1323 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Nme9A0A1L1SUL6 329 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cyp2d34L7N463 504 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Sparcl1P70663 650 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fxr1Q61584 677 aaKnown RBP12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Galnt15Q9D2N8 638 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Large1Q9Z1M7 756 aa12.08□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ppfia4B8QI36 1187 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ap1g2O88512 791 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Brd2Q7JJ13 798 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Trerf1Q8BXJ2 1205 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Hic2Q9JLZ6 619 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Camta1A2A891 1682 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tcof1O08784 1320 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 A430078G23RikE9Q7Y4 484 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 NpcdF8VQB8 469 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 LbrQ3U9G9 626 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rc3h1Q4VGL6 1130 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rhpn1Q61085 643 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Nek5Q7TSC3 627 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cacnb1Q8R3Z5 597 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ndufv1Q91YT0 464 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 KynuQ9CXF0 464 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tmem47Q9JJG6 181 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tex13c2A0A0G2JGA3 530 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 1700003F12RikA2AKE5 210 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fkbp1aP26883 108 aaKnown RBP12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gpt2Q8BGT5 522 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tpcn1Q9EQJ0 817 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Capn12Q9ER56 720 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tmem191cQ9JJB1 302 aa12.07□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tubb5P99024 444 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms