RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W SCS3P53012 380 aa5.85□□□□□ -1.47
RPN7YPR108W COG2P53271 262 aa5.85□□□□□ -1.47
RPN7YPR108W LSM3P57743 89 aaKnown RBP5.85□□□□□ -1.47
RPN7YPR108W YPL034WQ03083 165 aa5.85□□□□□ -1.47
RPN7YPR108W HEL2Q05580 639 aaKnown RBP5.85□□□□□ -1.47
RPN7YPR108W YDR278CQ05612 105 aa5.85□□□□□ -1.47
RPN7YPR108W MRX10Q05648 414 aa5.85□□□□□ -1.47
RPN7YPR108W GGA1Q06336 557 aa5.85□□□□□ -1.47
RPN7YPR108W SWC7Q06707 132 aa5.85□□□□□ -1.47
RPN7YPR108W YOL019WQ08157 551 aa5.85□□□□□ -1.47
RPN7YPR108W MUM3Q08750 479 aa5.85□□□□□ -1.47
RPN7YPR108W SLP1Q12232 587 aa5.85□□□□□ -1.47
RPN7YPR108W MDY2Q12285 212 aa5.85□□□□□ -1.47
RPN7YPR108W MOT1P32333 1867 aa5.84□□□□□ -1.47
RPN7YPR108W TEF1P02994 458 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W SST2P11972 698 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W TAL1P15019 335 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W SEC14P24280 304 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W POT1P27796 417 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
RPN7YPR108W DGR2P32330 852 aa5.84□□□□□ -1.47
RPN7YPR108W ASK1P35734 292 aa5.84□□□□□ -1.47
RPN7YPR108W HES1P35843 434 aa5.84□□□□□ -1.47
RPN7YPR108W YKR078WP36158 585 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W POL12P38121 705 aaPredicted RBP5.84□□□□□ -1.47
RPN7YPR108W FHL1P39521 936 aa5.84□□□□□ -1.47
RPN7YPR108W PFK26P40433 827 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W RSC8P43609 557 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W BUD13P46947 266 aaPredicted RBP5.84□□□□□ -1.47
RPN7YPR108W YGL108CP53139 140 aa5.84□□□□□ -1.47
RPN7YPR108W NMA2P53204 395 aa5.84□□□□□ -1.47
RPN7YPR108W ARC35P53731 342 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W DUS1P53759 423 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W GOR1P53839 350 aa5.84□□□□□ -1.47
RPN7YPR108W YNL011CP53980 444 aa5.84□□□□□ -1.47
RPN7YPR108W YNL010WP53981 241 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W RPM2Q02773 1202 aa5.84□□□□□ -1.47
RPN7YPR108W ACL4Q03771 387 aa5.84□□□□□ -1.47
RPN7YPR108W BUD22Q04347 519 aaKnown RBP5.84□□□□□ -1.47
RPN7YPR108W BLS1Q06071 122 aa5.84□□□□□ -1.47
RPN7YPR108W GMC2Q06201 188 aa5.84□□□□□ -1.47
RPN7YPR108W ATG26Q06321 1198 aa5.84□□□□□ -1.47
RPN7YPR108W COS7Q07788 383 aa5.84□□□□□ -1.47
RPN7YPR108W YOR012WQ12351 137 aa5.84□□□□□ -1.47
RPN7YPR108W YDR524C-BQ3E6R4 66 aa5.84□□□□□ -1.47
RPN7YPR108W ECM29P38737 1868 aa5.83□□□□□ -1.48
RPN7YPR108W YPR089WO13585 888 aa5.83□□□□□ -1.48
RPN7YPR108W TPK2P06245 380 aa5.83□□□□□ -1.48
RPN7YPR108W SCH9P11792 824 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W HMG2P12684 1045 aa5.83□□□□□ -1.48
RPN7YPR108W GFD2P25370 566 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W SPS22P25380 463 aa5.83□□□□□ -1.48
RPN7YPR108W PYC2P32327 1180 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W AEP1P32493 518 aa5.83□□□□□ -1.48
RPN7YPR108W IMP3P32899 183 aaPredicted RBP5.83□□□□□ -1.48
RPN7YPR108W MRT4P33201 236 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W VPS21P36017 210 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W TRM5P38793 499 aa5.83□□□□□ -1.48
RPN7YPR108W SEC31P38968 1273 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W YEN1P40028 759 aa5.83□□□□□ -1.48
RPN7YPR108W ATM1P40416 690 aa5.83□□□□□ -1.48
RPN7YPR108W INP51P40559 946 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W SEC26P41810 973 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W ALY2P47029 1046 aa5.83□□□□□ -1.48
RPN7YPR108W ZAP1P47043 880 aa5.83□□□□□ -1.48
RPN7YPR108W MPS3P47069 682 aa5.83□□□□□ -1.48
RPN7YPR108W MAD3P47074 515 aa5.83□□□□□ -1.48
RPN7YPR108W TAN1P53072 289 aaPredicted RBP5.83□□□□□ -1.48
RPN7YPR108W BOL2P53082 120 aa5.83□□□□□ -1.48
RPN7YPR108W USE1P53146 245 aa5.83□□□□□ -1.48
RPN7YPR108W TGL2P54857 326 aa5.83□□□□□ -1.48
RPN7YPR108W SPP2Q02521 185 aa5.83□□□□□ -1.48
RPN7YPR108W IRC15Q02733 499 aa5.83□□□□□ -1.48
RPN7YPR108W GCN5Q03330 439 aa5.83□□□□□ -1.48
RPN7YPR108W YDR476CQ03362 224 aa5.83□□□□□ -1.48
RPN7YPR108W YMR209CQ03648 457 aa5.83□□□□□ -1.48
RPN7YPR108W SPC2Q04969 178 aa5.83□□□□□ -1.48
RPN7YPR108W ECM22Q05958 814 aaPredicted RBP5.83□□□□□ -1.48
RPN7YPR108W ECM30Q06673 1274 aa5.83□□□□□ -1.48
RPN7YPR108W HRK1Q08732 759 aaKnown RBP5.83□□□□□ -1.48
RPN7YPR108W YPR202WQ08993 238 aa5.83□□□□□ -1.48
RPN7YPR108W APM4Q99186 491 aa5.83□□□□□ -1.48
RPN7YPR108W RIF1P29539 1916 aa5.83□□□□□ -1.48
RPN7YPR108W RPL24AP04449 155 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W SEC63P14906 663 aa5.82□□□□□ -1.48
RPN7YPR108W NSP1P14907 823 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W RPL5P26321 297 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W ADK2P26364 225 aa5.82□□□□□ -1.48
RPN7YPR108W PHO91P27514 894 aa5.82□□□□□ -1.48
RPN7YPR108W RAD14P28519 371 aa5.82□□□□□ -1.48
RPN7YPR108W HXT3P32466 567 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W UTR2P32623 467 aa5.82□□□□□ -1.48
RPN7YPR108W YPT52P36018 234 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W YKR051WP36142 418 aa5.82□□□□□ -1.48
RPN7YPR108W GRS1P38088 690 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W URA8P38627 578 aaPredicted RBP5.82□□□□□ -1.48
RPN7YPR108W SRP72P38688 640 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W TVP23P38962 199 aa5.82□□□□□ -1.48
RPN7YPR108W ACO2P39533 789 aa5.82□□□□□ -1.48
RPN7YPR108W IES5P40060 125 aa5.82□□□□□ -1.48
RPN7YPR108W IME4P41833 600 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms