RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W CLB3P24870 427 aa3.83□□□□□ -1.8
NUP85YJR042W HSP104P31539 908 aaKnown RBP3.83□□□□□ -1.8
NUP85YJR042W AFG1P32317 509 aa3.83□□□□□ -1.8
NUP85YJR042W HMX1P32339 317 aa3.83□□□□□ -1.8
NUP85YJR042W KRE6P32486 720 aa3.83□□□□□ -1.8
NUP85YJR042W EHT1P38295 451 aa3.83□□□□□ -1.8
NUP85YJR042W SLZ1P40167 298 aa3.83□□□□□ -1.8
NUP85YJR042W CAB2P40506 365 aa3.83□□□□□ -1.8
NUP85YJR042W LOC1P43586 204 aaPredicted RBP3.83□□□□□ -1.8
NUP85YJR042W ALK1P43633 760 aaKnown RBP3.83□□□□□ -1.8
NUP85YJR042W ECM27P47144 725 aa3.83□□□□□ -1.8
NUP85YJR042W CUE3P53137 624 aaKnown RBP3.83□□□□□ -1.8
NUP85YJR042W MLC1P53141 149 aa3.83□□□□□ -1.8
NUP85YJR042W YGL036WP53185 909 aaPredicted RBP3.83□□□□□ -1.8
NUP85YJR042W ORC4P54791 529 aa3.83□□□□□ -1.8
NUP85YJR042W TRS31Q03337 283 aa3.83□□□□□ -1.8
NUP85YJR042W PPN1Q04119 674 aa3.83□□□□□ -1.8
NUP85YJR042W CUR1Q06469 252 aa3.83□□□□□ -1.8
NUP85YJR042W YEH1Q07804 573 aa3.83□□□□□ -1.8
NUP85YJR042W TMA16Q08687 178 aa3.83□□□□□ -1.8
NUP85YJR042W UPC2Q12151 913 aa3.83□□□□□ -1.8
NUP85YJR042W BUG1Q12191 341 aa3.83□□□□□ -1.8
NUP85YJR042W JIP3O13555 125 aa3.82□□□□□ -1.8
NUP85YJR042W TPK2P06245 380 aa3.82□□□□□ -1.8
NUP85YJR042W CAR2P07991 424 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W YML002WP0CF17 737 aa3.82□□□□□ -1.8
NUP85YJR042W EST1P17214 699 aaPredicted RBP3.82□□□□□ -1.8
NUP85YJR042W ERG6P25087 383 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W NTG1P31378 399 aa3.82□□□□□ -1.8
NUP85YJR042W DOA4P32571 926 aa3.82□□□□□ -1.8
NUP85YJR042W VID24P38263 362 aa3.82□□□□□ -1.8
NUP85YJR042W STB5P38699 743 aa3.82□□□□□ -1.8
NUP85YJR042W MLH1P38920 769 aa3.82□□□□□ -1.8
NUP85YJR042W YNL195CP40168 261 aa3.82□□□□□ -1.8
NUP85YJR042W PFK26P40433 827 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W YIL077CP40508 320 aa3.82□□□□□ -1.8
NUP85YJR042W DOT5P40553 215 aa3.82□□□□□ -1.8
NUP85YJR042W ELP2P42935 788 aa3.82□□□□□ -1.8
NUP85YJR042W CAK1P43568 368 aaPredicted RBP3.82□□□□□ -1.8
NUP85YJR042W UBP15P50101 1230 aa3.82□□□□□ -1.8
NUP85YJR042W TAF4P50105 388 aa3.82□□□□□ -1.8
NUP85YJR042W BIO3P50277 480 aa3.82□□□□□ -1.8
NUP85YJR042W MNT4P53745 580 aa3.82□□□□□ -1.8
NUP85YJR042W DUS1P53759 423 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W SQS1P53866 767 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W RHO5P53879 331 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W HED1Q03937 162 aa3.82□□□□□ -1.8
NUP85YJR042W TCO89Q08921 799 aa3.82□□□□□ -1.8
NUP85YJR042W RIM20Q12033 661 aa3.82□□□□□ -1.8
NUP85YJR042W RNR2P09938 399 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W HMG2P12684 1045 aa3.82□□□□□ -1.8
NUP85YJR042W UNG1P12887 359 aa3.82□□□□□ -1.8
NUP85YJR042W SEF1P34228 1148 aa3.82□□□□□ -1.8
NUP85YJR042W UBP11P36026 717 aa3.82□□□□□ -1.8
NUP85YJR042W TPO5P36029 618 aa3.82□□□□□ -1.8
NUP85YJR042W YBR139WP38109 508 aa3.82□□□□□ -1.8
NUP85YJR042W ELO3P40319 345 aa3.82□□□□□ -1.8
NUP85YJR042W IST3P40565 148 aaPredicted RBP3.82□□□□□ -1.8
NUP85YJR042W HYR1P40581 163 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W SMC3P47037 1230 aa3.82□□□□□ -1.8
NUP85YJR042W APT1P49435 187 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W HOP2P53187 214 aa3.82□□□□□ -1.8
NUP85YJR042W MDR1P53258 950 aa3.82□□□□□ -1.8
NUP85YJR042W YNL143CP53908 130 aa3.82□□□□□ -1.8
NUP85YJR042W HMO1Q03973 246 aaKnown RBP3.82□□□□□ -1.8
NUP85YJR042W GIS4Q04233 774 aa3.82□□□□□ -1.8
NUP85YJR042W CTF3Q12748 733 aa3.82□□□□□ -1.8
NUP85YJR042W TUB3P09734 445 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W PUT4P15380 627 aa3.81□□□□□ -1.8
NUP85YJR042W PRP6P19735 899 aaPredicted RBP3.81□□□□□ -1.8
NUP85YJR042W GRR1P24814 1151 aa3.81□□□□□ -1.8
NUP85YJR042W RPS7AP26786 190 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W PRE2P30656 287 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W DPH5P32469 300 aaPredicted RBP3.81□□□□□ -1.8
NUP85YJR042W RAD24P32641 659 aa3.81□□□□□ -1.8
NUP85YJR042W YSC84P32793 468 aa3.81□□□□□ -1.8
NUP85YJR042W LRG1P35688 1017 aa3.81□□□□□ -1.8
NUP85YJR042W SAP190P36123 1033 aa3.81□□□□□ -1.8
NUP85YJR042W POA1P38218 177 aa3.81□□□□□ -1.8
NUP85YJR042W YHR033WP38690 423 aa3.81□□□□□ -1.8
NUP85YJR042W SFB3P38810 929 aa3.81□□□□□ -1.8
NUP85YJR042W SPT8P38915 602 aa3.81□□□□□ -1.8
NUP85YJR042W ALD5P40047 520 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W ALG5P40350 334 aa3.81□□□□□ -1.8
NUP85YJR042W GCD14P46959 383 aaPredicted RBP3.81□□□□□ -1.8
NUP85YJR042W EXG2P52911 562 aa3.81□□□□□ -1.8
NUP85YJR042W SOK2P53438 785 aaPredicted RBP3.81□□□□□ -1.8
NUP85YJR042W DSE4P53753 1117 aa3.81□□□□□ -1.8
NUP85YJR042W NAM8Q00539 523 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W RQC1Q05468 723 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W RIB2Q12362 591 aaKnown RBP3.81□□□□□ -1.8
NUP85YJR042W YJR112W-AQ3E743 109 aa3.81□□□□□ -1.8
NUP85YJR042W TDH1P00360 332 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W HOM2P13663 365 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W FRS1P15624 595 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W YCR061WP25639 631 aa3.8□□□□□ -1.8
NUP85YJR042W SYN8P31377 255 aa3.8□□□□□ -1.8
NUP85YJR042W SMY1P32364 656 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W HXT3P32466 567 aaKnown RBP3.8□□□□□ -1.8
NUP85YJR042W TYE7P33122 291 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms