RNA–Protein interactions for RNA: YHL009W-B

YHL009W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YHL009W-B, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-BYHL009W-B CST26P38226 397 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B BCD1P38772 366 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B YIL059CP40520 121 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B TAH11P47112 604 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B SAM50P53969 484 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B YKR011CQ02209 353 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B GCN5Q03330 439 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B RCR2Q03446 210 aaKnown RBP-0.56□□□□□ -2.5
YHL009W-BYHL009W-B YDR338CQ05497 695 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B YLR281CQ05863 155 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B PLB3Q08108 686 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B DIS3Q08162 1001 aaKnown RBP-0.56□□□□□ -2.5
YHL009W-BYHL009W-B BBP1Q12365 385 aa-0.56□□□□□ -2.5
YHL009W-BYHL009W-B SNF5P18480 905 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B PMA2P19657 947 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CMK2P22517 447 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MSH2P25847 964 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B FUN19P28003 413 aaPredicted RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B NGG1P32494 702 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B SMY2P32909 740 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YCR041WP37265 110 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B APM3P38153 483 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B OST1P41543 476 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RPL10P41805 221 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B EPL1P43572 832 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B BIR1P47134 954 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ERP6P53198 216 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CPR6P53691 371 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CTL1Q03220 320 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MRPL1Q04599 285 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ULA1Q12059 462 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YOL098CQ12496 1037 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ADE6P38972 1358 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MYO1P08964 1928 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ERG20P08524 352 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B BAR1P12630 587 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RNR1P21524 888 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ERV1P27882 189 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RAD5P32849 1169 aaPredicted RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MRS6P32864 603 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RMA1P36001 430 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B LHS1P36016 881 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ERG7P38604 731 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RIM11P38615 370 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B SAW1P39735 261 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B HEM14P40012 539 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ARB1P40024 610 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B GET2P40056 285 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B KHA1P40309 873 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RNR4P49723 345 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B NBP1P52919 319 aaPredicted RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ESBP6P53918 673 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B BOP3P53958 396 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ATG21Q02887 496 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B SRT1Q03175 343 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B EIS1Q05050 843 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ARR1Q06596 294 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MRPL35Q06678 367 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YPR084WQ06821 456 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CYK3Q07533 885 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RTK1Q12100 620 aaPredicted RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YRA1Q12159 226 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B POL1P13382 1468 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MMS22Q06164 1454 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MRP13P12686 339 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B FUR1P18562 216 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B COX11P19516 300 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B IME1P21190 360 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B ADE2P21264 571 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MIH1P23748 554 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B SIN4P32259 974 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B APE2P32454 952 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B VMA11P32842 164 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B PSD1P39006 500 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B GDH3P39708 457 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B LAM5P43560 674 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YFL040WP43562 540 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YPP1P46951 817 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YJL163CP46996 555 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B IML2P47031 731 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B PMT5P52867 743 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YGL140CP53120 1219 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B RTS3P53289 263 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B SSU72P53538 206 aaPredicted RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B NCE103P53615 221 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YPL080CQ02826 108 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B NAN1Q02931 896 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YDR179W-AQ03983 463 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B MCP2Q06567 569 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YDR061WQ12298 539 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CAR1P00812 333 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CBS2P14905 389 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B PUT4P15380 627 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B FRS1P15624 595 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B PHO84P25297 587 aaKnown RBP-0.57□□□□□ -2.5
YHL009W-BYHL009W-B YCR043CP25361 127 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B CPR3P25719 182 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B HXT1P32465 570 aa-0.57□□□□□ -2.5
YHL009W-BYHL009W-B NRP1P32770 719 aaKnown RBP RIP-Chip data-0.57□□□□□ -2.5not detected
YHL009W-BYHL009W-B YKR045CP36138 183 aa-0.57□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 141.2 ms