RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 WDR78Q5VTH9 848 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-231ENST00000641939 ATG4CQ96DT6 458 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
PHGDH-231ENST00000641939 RANBP6O60518 1105 aaKnown RBP17.81■□□□□ 0.44
PHGDH-231ENST00000641939 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
PHGDH-231ENST00000641939 CYP2B6P20813 491 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 MORN1Q5T089 497 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 USP6NLQ92738 828 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 SPATC1LQ9H0A9 340 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 RNF208Q9H0X6 261 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
PHGDH-231ENST00000641939 HMGCRP04035 888 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 RGS2P41220 211 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 HAND2P61296 217 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
PHGDH-231ENST00000641939 GMCL1P1Q8NEA9 526 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 NUP88Q99567 741 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-231ENST00000641939 MOV10L1Q9BXT6 1211 aaKnown RBP17.8■□□□□ 0.44
PHGDH-231ENST00000641939 UNC93B1Q9H1C4 597 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 TOMM22Q9NS69 142 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 ADAMTS5Q9UNA0 930 aa17.8■□□□□ 0.44
PHGDH-231ENST00000641939 SLC15A5A6NIM6 579 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 GJB1P08034 283 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
PHGDH-231ENST00000641939 PTPREP23469 700 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 PLS1Q14651 629 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 AKNAD1Q5T1N1 836 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 CENPQQ7L2Z9 268 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-231ENST00000641939 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
PHGDH-231ENST00000641939 SHCBP1Q8NEM2 672 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 SLF1Q9BQI6 1058 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 IL17RBQ9NRM6 502 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 STX8Q9UNK0 236 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 IVNS1ABPQ9Y6Y0 642 aa17.79■□□□□ 0.44
PHGDH-231ENST00000641939 ZNF236Q9UL36 1845 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 VWA5AO00534 786 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 ZNF213O14771 459 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 NMT2O60551 498 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 ERCC3P19447 782 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 MAP2K5Q13163 448 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 TMEM132BQ14DG7 1078 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 RRP12Q5JTH9 1297 aaKnown RBP17.78■□□□□ 0.44
PHGDH-231ENST00000641939 SLFN13Q68D06 897 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 MFSD6Q6ZSS7 791 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 NKX2-3Q8TAU0 364 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 STAG1Q8WVM7 1258 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 TRIB2Q92519 343 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 APBA2Q99767 749 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
PHGDH-231ENST00000641939 RNF41Q9H4P4 317 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-231ENST00000641939 RAD50Q92878 1312 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 ZKSCAN1P17029 563 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-231ENST00000641939 CHMLP26374 656 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 GJA8P48165 433 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 GRB14Q14449 540 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 TBC1D10CQ8IV04 446 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
PHGDH-231ENST00000641939 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 IL25Q9H293 177 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 MROH8Q9H579 483 aa17.77■□□□□ 0.44
PHGDH-231ENST00000641939 STRNO43815 780 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 SLC25A27O95847 323 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 BMP3P12645 472 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 NOVP48745 357 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 TRIM32Q13049 653 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 REPS2Q8NFH8 660 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 TCP11L1Q9NUJ3 509 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 CTNNA3Q9UI47 895 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
PHGDH-231ENST00000641939 RPTORQ8N122 1335 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 HOXC6P09630 235 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 STAT3P40763 770 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 CCL14Q16627 93 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 IMMTQ16891 758 aaKnown RBP17.75■□□□□ 0.43
PHGDH-231ENST00000641939 RIOX2Q8IUF8 465 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
PHGDH-231ENST00000641939 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 GMCL1Q96IK5 515 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 PAK6Q9NQU5 681 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-231ENST00000641939 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
PHGDH-231ENST00000641939 CEP290O15078 2479 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 SGPL1O95470 568 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 ADORA2AP29274 412 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 COPB2P35606 906 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 SLC1A4P43007 532 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 NT5C2P49902 561 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 MAP3K21Q5TCX8 1036 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 ESR2Q92731 530 aa17.74■□□□□ 0.43
PHGDH-231ENST00000641939 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
PHGDH-231ENST00000641939 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-231ENST00000641939 ZNF214Q9UL59 606 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-231ENST00000641939 ISY1Q9ULR0 285 aaKnown RBP17.74■□□□□ 0.43
PHGDH-231ENST00000641939 CTDP1Q9Y5B0 961 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-231ENST00000641939 NEDD4P46934 1319 aa17.73■□□□□ 0.43
PHGDH-231ENST00000641939 TMEM232C9JQI7 657 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms