RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 FOXD4L6Q3SYB3 417 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-214ENST00000641314 FOXD4L3Q6VB84 417 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-214ENST00000641314 KCTD1Q719H9 257 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 SCYL3Q8IZE3 742 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 GMCL1P1Q8NEA9 526 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 ZNF526Q8TF50 670 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-214ENST00000641314 DCAF4Q8WV16 495 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 KLRG1Q96E93 195 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 UBA5Q9GZZ9 404 aa20.38■□□□□ 0.85
PHGDH-214ENST00000641314 NDUFB10O96000 172 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
PHGDH-214ENST00000641314 SLC35G1Q2M3R5 365 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 FEZ1Q99689 392 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 SYNPO2Q9UMS6 1093 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 TMX2Q9Y320 296 aa20.37■□□□□ 0.85
PHGDH-214ENST00000641314 CYTH3O43739 400 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 USP2O75604 605 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-214ENST00000641314 NF2P35240 595 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 PKN1Q16512 942 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 GPATCH4Q5T3I0 446 aaKnown RBP20.36■□□□□ 0.85
PHGDH-214ENST00000641314 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 SPICE1Q8N0Z3 855 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 FBXO18Q8NFZ0 1043 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 NUP88Q99567 741 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-214ENST00000641314 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 VAT1LQ9HCJ6 419 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 PICK1Q9NRD5 415 aa20.36■□□□□ 0.85
PHGDH-214ENST00000641314 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-214ENST00000641314 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
PHGDH-214ENST00000641314 PPP1R12BO60237 982 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-214ENST00000641314 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
PHGDH-214ENST00000641314 KRT40Q6A162 431 aa20.35■□□□□ 0.85
PHGDH-214ENST00000641314 GMCL1Q96IK5 515 aa20.35■□□□□ 0.85
PHGDH-214ENST00000641314 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
PHGDH-214ENST00000641314 RBM27Q9P2N5 1060 aaKnown RBP20.35■□□□□ 0.85
PHGDH-214ENST00000641314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.34■□□□□ 0.852e-7■■□□□ 13.5
PHGDH-214ENST00000641314 CHAMP1Q96JM3 812 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 NMRK2Q9NPI5 230 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 BAG4O95429 457 aaKnown RBP20.34■□□□□ 0.85
PHGDH-214ENST00000641314 SCG2P13521 617 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 SMARCA1P28370 1054 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 SLC16A2P36021 539 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 TTLL12Q14166 644 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-214ENST00000641314 PFKFB3Q16875 520 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-214ENST00000641314 HOMER1Q86YM7 354 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 RRP36Q96EU6 259 aaKnown RBP20.34■□□□□ 0.85
PHGDH-214ENST00000641314 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
PHGDH-214ENST00000641314 BMP3P12645 472 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 XBP1P17861 261 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 PTPRAP18433 802 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 IREB2P48200 963 aaKnown RBP20.33■□□□□ 0.84
PHGDH-214ENST00000641314 RESTQ13127 1097 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 NFKBIBQ15653 356 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 KIAA1755Q5JYT7 1200 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 NOL9Q5SY16 702 aaKnown RBP20.33■□□□□ 0.84
PHGDH-214ENST00000641314 PIGSQ96S52 555 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 AS3MTQ9HBK9 375 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 SEC63Q9UGP8 760 aaKnown RBP20.33■□□□□ 0.84
PHGDH-214ENST00000641314 KCNJ14Q9UNX9 436 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 ATP6V1DQ9Y5K8 247 aa20.33■□□□□ 0.84
PHGDH-214ENST00000641314 MAP3K9P80192 1104 aa20.32■□□□□ 0.84
PHGDH-214ENST00000641314 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-214ENST00000641314 GPKOWQ92917 476 aaPredicted RBP eCLIP20.32■□□□□ 0.84
PHGDH-214ENST00000641314 RIOX1Q9H6W3 641 aa20.32■□□□□ 0.84
PHGDH-214ENST00000641314 OTOFQ9HC10 1997 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 TMEM232C9JQI7 657 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 FAM83BQ5T0W9 1011 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 HEATR3Q7Z4Q2 680 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 ADGRF4Q8IZF3 695 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 ZSCAN16Q9H4T2 348 aaPredicted RBP20.31■□□□□ 0.84
PHGDH-214ENST00000641314 CSADQ9Y600 493 aa20.31■□□□□ 0.84
PHGDH-214ENST00000641314 TRAF5O00463 557 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 SPP2Q13103 211 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 MTMR2Q13614 643 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
PHGDH-214ENST00000641314 VGLL4Q14135 290 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 FAM173BQ6P4H8 233 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 CLEC17AQ6ZS10 378 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-214ENST00000641314 MOB2Q70IA6 237 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 LDHDQ86WU2 507 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 RGS22Q8NE09 1264 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 SHISA4Q96DD7 197 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 ZNF408Q9H9D4 720 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 JMJD4Q9H9V9 463 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 SNCAIPQ9Y6H5 919 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 ZHX2Q9Y6X8 837 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 PAPPA2Q9BXP8 1791 aa20.3■□□□□ 0.84
PHGDH-214ENST00000641314 USP17L10C9JJH3 530 aa20.29■□□□□ 0.84
PHGDH-214ENST00000641314 MMP1P03956 469 aa20.29■□□□□ 0.84
PHGDH-214ENST00000641314 KIF23Q02241 960 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-214ENST00000641314 SAFBQ15424 915 aaKnown RBP eCLIP20.29■□□□□ 0.84
PHGDH-214ENST00000641314 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
PHGDH-214ENST00000641314 KIAA1683Q9H0B3 1180 aa20.29■□□□□ 0.84
PHGDH-214ENST00000641314 TRIM75PA6NK02 468 aa20.29■□□□□ 0.84
PHGDH-214ENST00000641314 KIF28PB7ZC32 967 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms