RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 COPB1P53618 953 aaKnown RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 SETQ01105 290 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 NFRKBQ6P4R8 1299 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 ACSBG1Q96GR2 724 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 KCNG1Q9UIX4 513 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 KIF13AQ9H1H9 1805 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 PPP1R3GB7ZBB8 358 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 EIF3HO15372 352 aaKnown RBP eCLIP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 PRKAB2O43741 272 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 PAX7P23759 505 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 WDR93Q6P2C0 686 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 UTYO14607 1347 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 GRIN2DO15399 1336 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 PPP1R12BO60237 982 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 NTRK3Q16288 839 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 KIF6Q6ZMV9 814 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 NEBLO76041 1014 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 FOXO4P98177 505 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 TSR1Q2NL82 804 aaKnown RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 NELFBQ8WX92 580 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 RGPD1P0DJD0 1748 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 MYO1BO43795 1136 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 RNPC3Q96LT9 517 aaKnown RBP15.41■□□□□ 0.06
SCARB2-227ENST00000640957 CEP89Q96ST8 783 aa15.41■□□□□ 0.06
SCARB2-227ENST00000640957 CDKL5O76039 1030 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 FAM153BP0C7A2 387 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 PMS1P54277 932 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 PPFIA1Q13136 1202 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 FAM153CQ494X1 144 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TMC4Q7Z404 712 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 LRWD1Q9UFC0 647 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 FAM153AQ9UHL3 310 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 LUC7L2Q9Y383 392 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 B4DLN1 442 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 MOCS3O95396 460 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TRIM21P19474 475 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 PBX1P40424 430 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 HDLBPQ00341 1268 aaKnown RBP15.4■□□□□ 0.06
SCARB2-227ENST00000640957 NNTQ13423 1086 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TBC1D31Q96DN5 1066 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 CABS1Q96KC9 395 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 TACC3Q9Y6A5 838 aa15.4■□□□□ 0.06
SCARB2-227ENST00000640957 BUB1O43683 1085 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 KCNQ4P56696 695 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 SF3B2Q13435 895 aaKnown RBP15.39■□□□□ 0.05
SCARB2-227ENST00000640957 SPRED3Q2MJR0 410 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 OR2W6PQ8NHA6 318 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 NAA15Q9BXJ9 866 aaKnown RBP15.39■□□□□ 0.05
SCARB2-227ENST00000640957 SLC4A4Q9Y6R1 1079 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 E7EVH7 732 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 MMP1P03956 469 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 AARSP49588 968 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCARB2-227ENST00000640957 MIGA1Q8NAN2 632 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC43Q96MW1 224 aaKnown RBP15.39■□□□□ 0.05
SCARB2-227ENST00000640957 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 OPLAHO14841 1288 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 CPP00450 1065 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 MCM7P33993 719 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 BICDL1Q6ZP65 573 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 RPAINQ86UA6 219 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 ZKSCAN4Q969J2 545 aaPredicted RBP15.39■□□□□ 0.05
SCARB2-227ENST00000640957 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 NFU1Q9UMS0 254 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 CAPN6Q9Y6Q1 641 aa15.39■□□□□ 0.05
SCARB2-227ENST00000640957 GSCP56915 257 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-227ENST00000640957 TCIRG1Q13488 830 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 APPBP2Q92624 585 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 ZIM3Q96PE6 472 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 MINDY4BA8MYZ0 360 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 CCDC181Q5TID7 509 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 CDKAL1Q5VV42 579 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 TICAM2Q86XR7 235 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 IGDCC4Q8TDY8 1250 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
SCARB2-227ENST00000640957 PACSIN2Q9UNF0 486 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-227ENST00000640957 ZNF532Q9HCE3 1301 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 ADAMTS3O15072 1205 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 ERCC5P28715 1186 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 SWT1Q5T5J6 900 aaKnown RBP15.37■□□□□ 0.05
SCARB2-227ENST00000640957 TYW1BQ6NUM6 668 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 WDR59Q6PJI9 974 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 TRIM22Q8IYM9 498 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 OR8K1Q8NGG5 319 aa15.37■□□□□ 0.05
SCARB2-227ENST00000640957 BTG4Q9NY30 223 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms