RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CTDNEP1O95476 244 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 CDC27P30260 824 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 APLP1P51693 650 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 USP14P54578 494 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 HUNKP57058 714 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 SCRN1Q12765 414 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 MTMR2Q13614 643 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-225ENST00000640900 USP17L2Q6R6M4 530 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 RASGRP2Q7LDG7 609 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 RASAL3Q86YV0 1011 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 OPTNQ96CV9 577 aa10.65□□□□□ -0.7
SCARB2-225ENST00000640900 GOLGA8BA8MQT2 603 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 K7ELQ4 463 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 WDR46O15213 610 aaKnown RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 SLC10A3P09131 477 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 FGD1P98174 961 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 ASPRV1Q53RT3 343 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 GPATCH4Q5T3I0 446 aaKnown RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 GPAT2Q6NUI2 795 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 RGMBQ6NW40 437 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 NBPF11Q86T75 865 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 MTMR8Q96EF0 704 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
SCARB2-225ENST00000640900 MYL10Q9BUA6 226 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 GOPCQ9HD26 462 aa10.64□□□□□ -0.71
SCARB2-225ENST00000640900 PARP14Q460N5 1801 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 CCDC196A0A1B0GTZ2 297 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 CYTH3O43739 400 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 IFNAR1P17181 557 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 VCAM1P19320 739 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 KIF5BP33176 963 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 ADD1P35611 737 aaKnown RBP10.63□□□□□ -0.71
SCARB2-225ENST00000640900 GNAQP50148 359 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 METAP2P50579 478 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCARB2-225ENST00000640900 HMGCS2P54868 508 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 RTN1Q16799 776 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 STAG2Q8N3U4 1231 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 SMARCC2Q8TAQ2 1214 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 LLPHQ9BRT6 129 aaKnown RBP10.63□□□□□ -0.71
SCARB2-225ENST00000640900 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 RIOX1Q9H6W3 641 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 RBM28Q9NW13 759 aaKnown RBP10.63□□□□□ -0.71
SCARB2-225ENST00000640900 ADAMTS5Q9UNA0 930 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 SLC45A1Q9Y2W3 748 aa10.63□□□□□ -0.71
SCARB2-225ENST00000640900 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-225ENST00000640900 TRIM75PA6NK02 468 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 GOLGA8AA7E2F4 631 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 PARP1P09874 1014 aaKnown RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 BMP3P12645 472 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 RXRAP19793 462 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 SLC1A4P43007 532 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 GTF2A2P52657 109 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 ATP2B2Q01814 1243 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 DGKZQ13574 1117 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 POTEHQ6S545 545 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 FASTKD5Q7L8L6 764 aaKnown RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 SRBD1Q8N5C6 995 aaKnown RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 NSUN7Q8NE18 718 aaKnown RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 CHMP4CQ96CF2 233 aa10.62□□□□□ -0.71
SCARB2-225ENST00000640900 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 NCOA5Q9HCD5 579 aaKnown RBP10.62□□□□□ -0.71
SCARB2-225ENST00000640900 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 KLRF2D3W0D1 207 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 PLEKHA8P1O95397 391 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 CETPP11597 493 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 FDPSP14324 419 aaKnown RBP10.61□□□□□ -0.71
SCARB2-225ENST00000640900 ZNF157P51786 506 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-225ENST00000640900 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 TREML2Q5T2D2 321 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 KCTD1Q719H9 257 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 HSCBQ8IWL3 235 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-225ENST00000640900 NUP133Q8WUM0 1156 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-225ENST00000640900 FEZ1Q99689 392 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 PTPN18Q99952 460 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 ZCCHC17Q9NP64 241 aaKnown RBP10.61□□□□□ -0.71
SCARB2-225ENST00000640900 FEM1BQ9UK73 627 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
SCARB2-225ENST00000640900 CNTNAP5Q8WYK1 1306 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 STK36Q9NRP7 1315 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms