RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 TEKT1Q969V4 418 aa17.58■□□□□ 0.4
SPIN3-242ENST00000640577 NAT10Q9H0A0 1025 aaKnown RBP17.58■□□□□ 0.4
SPIN3-242ENST00000640577 SIPA1L1O43166 1804 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 ACTN4O43707 911 aaKnown RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 CRKP46108 304 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 EIF6P56537 245 aaKnown RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 IL17AQ16552 155 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 DACT2Q5SW24 774 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 FAM13BQ9NYF5 915 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 PYCARDQ9ULZ3 195 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 STXBP3O00186 592 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 ECE2O60344 883 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 GNAQP50148 359 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 HSD3B7Q9H2F3 369 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 MTMR4Q9NYA4 1195 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
SPIN3-242ENST00000640577 MORC2Q9Y6X9 1032 aaPredicted RBP17.57■□□□□ 0.4
SPIN3-242ENST00000640577 MCM7P33993 719 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 SHMT1P34896 483 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 ATP2C1P98194 919 aaPredicted RBP17.56■□□□□ 0.4
SPIN3-242ENST00000640577 AOC3Q16853 763 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 DRC7Q8IY82 874 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
SPIN3-242ENST00000640577 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 PLIN4Q96Q06 1357 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 PARP1P09874 1014 aaKnown RBP17.56■□□□□ 0.4
SPIN3-242ENST00000640577 LRMPQ12912 555 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
SPIN3-242ENST00000640577 BARHL2Q9NY43 387 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 SERPINB13Q9UIV8 391 aa17.56■□□□□ 0.4
SPIN3-242ENST00000640577 UTRNP46939 3433 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 SHROOM1Q2M3G4 852 aaPredicted RBP17.55■□□□□ 0.4
SPIN3-242ENST00000640577 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 PCDHA6Q9UN73 950 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 PCDHA8Q9Y5H6 950 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 POSTNQ15063 836 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.55■□□□□ 0.4
SPIN3-242ENST00000640577 HOMER1Q86YM7 354 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
SPIN3-242ENST00000640577 GREB1LQ9C091 1923 aaPredicted RBP17.54■□□□□ 0.4
SPIN3-242ENST00000640577 MYH4Q9Y623 1939 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 FRMPD2Q68DX3 1309 aaPredicted RBP17.54■□□□□ 0.4
SPIN3-242ENST00000640577 FAM196BA6NMK8 535 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 PDHBP11177 359 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 CALML3P27482 149 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 TCP10Q12799 353 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.54■□□□□ 0.4
SPIN3-242ENST00000640577 C4orf32Q8N8J7 132 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 MRFAP1L1Q96HT8 127 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 STK32BQ9NY57 414 aa17.54■□□□□ 0.4
SPIN3-242ENST00000640577 CASP1P29466 404 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 ARID5BQ14865 1188 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 ELOA2Q8IYF1 753 aaPredicted RBP17.53■□□□□ 0.4
SPIN3-242ENST00000640577 FERMT2Q96AC1 680 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 DHX58Q96C10 678 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 MAN1B1Q9UKM7 699 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 CDC25BP30305 580 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 TRAPPC10P48553 1259 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
SPIN3-242ENST00000640577 PIGSQ96S52 555 aa17.53■□□□□ 0.4
SPIN3-242ENST00000640577 GOLGA6L6A8MZA4 724 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 ATP1A3P13637 1013 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 NT5DC1Q5TFE4 455 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 SH3BP5LQ7L8J4 393 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 CNKSR1Q969H4 720 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 FAM198AQ9UFP1 575 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 DDTLA6NHG4 134 aaPredicted RBP17.52■□□□□ 0.4
SPIN3-242ENST00000640577 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 C21orf2O43822 256 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 LMOD1P29536 600 aaPredicted RBP17.52■□□□□ 0.4
SPIN3-242ENST00000640577 INF2Q27J81 1249 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 KIAA1524Q8TCG1 905 aa17.52■□□□□ 0.4
SPIN3-242ENST00000640577 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.4
SPIN3-242ENST00000640577 BMP15O95972 392 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 CDC25AP30304 524 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 RBM5P52756 815 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPIN3-242ENST00000640577 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 DAGLBQ8NCG7 672 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.39
SPIN3-242ENST00000640577 SPATA20Q8TB22 786 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 ZMYND12Q9H0C1 365 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
SPIN3-242ENST00000640577 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
SPIN3-242ENST00000640577 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms