RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 PLCG2P16885 1265 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 RPS12P25398 132 aaKnown RBP9.41□□□□□ -0.9
SCARB2-220ENST00000640076 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 MCF2L2Q86YR7 1114 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 NACAP1Q9BZK3 213 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 RNF181Q9P0P0 153 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 TAF6LQ9Y6J9 622 aa9.41□□□□□ -0.9
SCARB2-220ENST00000640076 LAMA4Q16363 1823 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 FAM13AO94988 1023 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 CYP21A2P08686 494 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 XRCC5P13010 732 aaKnown RBP9.4□□□□□ -0.9
SCARB2-220ENST00000640076 ZKSCAN1P17029 563 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-220ENST00000640076 COL9A1P20849 921 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 MAPK8P45983 427 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 TDO2P48775 406 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 TSGA10IPQ3SY00 556 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
SCARB2-220ENST00000640076 HELQQ8TDG4 1101 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 NAPBQ9H115 298 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 HDAC9Q9UKV0 1011 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 PCDHAC2Q9Y5I4 1007 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 FOCADQ5VW36 1801 aa9.4□□□□□ -0.9
SCARB2-220ENST00000640076 ECM29Q5VYK3 1845 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 NDUFB5O43674 189 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 GMPSP49915 693 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 RBM5P52756 815 aaKnown RBP eCLIP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 PLCB3Q01970 1234 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 FOXD4L6Q3SYB3 417 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 CFAP100Q494V2 611 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 CDC42EP5Q6NZY7 148 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 FOXD4L3Q6VB84 417 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 TEX11Q8IYF3 940 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 DCP1AQ9NPI6 582 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 DDX41Q9UJV9 622 aaKnown RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 ENPP3O14638 875 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 ZNF213O14771 459 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 MMP14P50281 582 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 HAND2P61296 217 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 EHHADHQ08426 723 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
SCARB2-220ENST00000640076 GPC2Q8N158 579 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 TGFBRAP1Q8WUH2 860 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 DPF2Q92785 391 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 USP40Q9NVE5 1235 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 NAV1Q8NEY1 1877 aa9.39□□□□□ -0.91
SCARB2-220ENST00000640076 DDX60LQ5H9U9 1706 aaKnown RBP9.38□□□□□ -0.91
SCARB2-220ENST00000640076 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-220ENST00000640076 EIF3JO75822 258 aaKnown RBP9.38□□□□□ -0.91
SCARB2-220ENST00000640076 FGRP09769 529 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 WEE1P30291 646 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 USP5P45974 858 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 ZNF280AP59817 542 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-220ENST00000640076 RABEP1Q15276 862 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 DLGAP5Q15398 846 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 RETREG3Q86VR2 466 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 PMM1Q92871 262 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 PRMT6Q96LA8 375 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-220ENST00000640076 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 NBPF3Q9H094 633 aa9.38□□□□□ -0.91
SCARB2-220ENST00000640076 FLT1P17948 1338 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ATN1P54259 1190 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 RACK1P63244 317 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 KRT32Q14532 448 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 CTR9Q6PD62 1173 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 STOX1Q6ZVD7 989 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ZNF654Q8IZM8 581 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 TM6SF1Q9BZW5 370 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 MYOZ2Q9NPC6 264 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 MCM9Q9NXL9 1143 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 MYH1P12882 1939 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 LAMB1P07942 1786 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 E7EWF7 191 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 SBK1Q52WX2 424 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 TBC1D10CQ8IV04 446 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ZBED3Q96IU2 234 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 JAKMIP1Q96N16 626 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 TDRD3Q9H7E2 651 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 DDX4Q9NQI0 724 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 GPRC5DQ9NZD1 345 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ARPP21Q9UBL0 812 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
SCARB2-220ENST00000640076 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
SCARB2-220ENST00000640076 CYP2D7A0A087X1C5 515 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 MINDY4BA8MYZ0 360 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 SMIM22K7EJ46 135 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 DNAJC6O75061 913 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 LGR5O75473 907 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 DDNO94850 711 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms